Query= MSMg01no162_d21.b1 MSMg01no162_d21.b1 CHROMAT_FILE:
MSMg01no162_d21.b1 PHD_FILE: MSMg01no162_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:33 2005
(316 letters)
>mm_chr14_12964923_12965636
Length = 714
Score = 538 bits (278), Expect = e-157
Identities = 303/312 (97%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 5 gaattctgtctacagtagaagaagccctctggctacaggtactgtgagtgatgtatcccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 514 gaattctgtctacagtagaagaagccctctggctacaggtactgtgagtgaagtatccct 455
Query: 65 attctataaatgcccagttatattcttgctgtacgagaacctagcctggataaacggcaa 124
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 454 attctataaatgcttagttatgttcttgctgtacgagaacctagcctggataaacggcaa 395
Query: 125 atgctctgcctgggctaactctctagcaaggctctctttttcctggccatgtgtcatact 184
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 394 atgctctgcctgggctaactctctagcaagg--ctctttttcctggccatgtatcatact 337
Query: 185 ccatccatcgctccatccctccatcctcatactcactgcagagttagcaatggtgacagt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 336 ccatccatcgctccatccctccatcctcatactcactgcagagttagcaatggtgagagt 277
Query: 245 gccacctacccaggagatacagagtctcatcacaccatggtacttgtaggtagtaaaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gccacctacccaggagatacagagtctcatcacaccatggtacttgtaggtagtaaaaga 217
Query: 305 gagatatagtct 316
||||||||||||
Sbjct: 216 gagatatagtct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 714
Length adjustment: 9
Effective length of query: 307
Effective length of database: 705
Effective search space: 216435
Effective search space used: 216435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_d21.g1 MSMg01no162_d21.g1 CHROMAT_FILE:
MSMg01no162_d21.g1 PHD_FILE: MSMg01no162_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:33 2005
(232 letters)
>mm_chr14_12854732_12855362
Length = 631
Score = 395 bits (204), Expect = e-114
Identities = 225/232 (96%), Gaps = 1/232 (0%)
Strand = Plus / Plus
Query: 1 tgtgcactaggctggcttgctgcttctctggatttgactgctctgagaatggcatctaag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 tgtgcactaggctggcttgctgcttctctggatttgactgctcagagaatggcatctaag 260
Query: 61 tggtggagaacttgcatttcctaatgttgtcttatcttctctgtccattgttattcctga 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 261 tggtggagaacttgcatttcctaatgttgtcttatcttctctgtc-attgttatccctga 319
Query: 121 tgatgagattctgaaacccagtgttagcgtctgggaaattgatggaaaggagaggtactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgatgagattctgaaacccagtgttagcgtctgggaaattgatggaaaggagaggtactg 379
Query: 181 agcccagcacactgtgttttctctctctaagaccatgctgtgctctgccctg 232
|||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 380 agcccagcacactgtgaaatctctctctaagaccatgctgtgctcttccctg 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
