Query= MSMg01no163_b11.b1 MSMg01no163_b11.b1 CHROMAT_FILE:
MSMg01no163_b11.b1 PHD_FILE: MSMg01no163_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:36 2005
(377 letters)
>mm_chr14_83035929_83036705
Length = 777
Score = 640 bits (331), Expect = 0.0
Identities = 360/371 (97%), Gaps = 6/371 (1%)
Strand = Plus / Plus
Query: 5 gaattcttatgtcaatattttcttccgtataaatttaccatatctattacataaagccca 64
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctatgtcaagattttcttccgtataaatttaccatatctattacataaagccca 264
Query: 65 tcttcatttttatcataatgcttcatcaaaagtttaaggttactgaagtaacattttctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttcatttttatcataatgcttcatcaaaagtttaaggttactgaagtaacattttctt 324
Query: 125 atttagagttttgaatatttatctatgacaattgaaatagttttcctctaccttaaaagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttagagttttgaatatttatctatgacaattgaaatagttttcctctaccttaaaagc 384
Query: 185 tgtctacattttctttttcttttttttttttttttggttaatgccactgagttttaattc 244
||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 385 tgtctactttttctttttctttttttttttttgtt---taatgccactgagttttaattc 441
Query: 245 ttctatgtctttttttt-attacgtattttcctcaattacatttccaatgctatcccaaa 303
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttctatgtctttttttttattacgtattttcctcaattacatttccaatgctatcccaaa 501
Query: 304 agtccctcatatcct-ccccctccactcccctacccacccatccccattttttggccctg 362
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agtccctcaca-ccttccccctccactcccctacccacccatccccattttttggccctg 560
Query: 363 gcattcccctg 373
|||||||||||
Sbjct: 561 gcattcccctg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_b11.g1 MSMg01no163_b11.g1 CHROMAT_FILE:
MSMg01no163_b11.g1 PHD_FILE: MSMg01no163_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:36 2005
(288 letters)
>mm_chr14_83121025_83121712
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Minus
Query: 1 attactgtataatttatctgaaatgccattatgtcatgtttattttgcatgacaattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 attactgtataatttatctgaaatgccattatgtcatgtttattttgcatgacaattttg 429
Query: 61 cttgataaagacttttgtattagcagtttatttttagtctcaaacacccagaggtttgat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 428 cttgataaagacttttgtattagcagtttatttttagtctcaaacactcagaggtttgat 369
Query: 121 taagtcctccagcctggttaacacctctttcaataaatactaactccatttaatcaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taagtcctccagcctggttaacacctctttcaataaatactaactccatttaatcaatcc 309
Query: 181 cactttaaatatggcaaattaatatacttctgataaatatgcccatttataaatgtattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cactttaaatatggcaaattaatatacttctgataaatatgcccatttataaatgtattc 249
Query: 241 accttgttcttatttcataatttatggtgaatacaaacaatttttaca 288
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 248 accttgttcttatttcataatttatggtgaatacaaacaaattttaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
