Query= MSMg01no164_h17.b1 MSMg01no164_h17.b1 CHROMAT_FILE:
MSMg01no164_h17.b1 PHD_FILE: MSMg01no164_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:21 2005
(321 letters)
>mm_chr14_75816142_75816862
Length = 721
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%)
Strand = Plus / Minus
Query: 5 gaattccatgttcaaatgtgtgtgaaatctattgtggtgtatctcgtgaaagcataggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaattccatgttcaaatgtgtgtgaaatctattgtggtgtatctcgtgaaagcataggaa 365
Query: 65 cttgggaagaacagaaaaatgctaagagataggtgagacttaagagagctgaccctcctg 124
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 364 cttgggaagaacagaaaaatgctaacagatagatgagacttaagagagctgaccctcctg 305
Query: 125 actagggggagtggagccatgagccttgctctgaatagcacttacagggcctttggctgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 actagggggagtggagccatgagccttgctctgaatagcacttacagggcctttggctgg 245
Query: 185 ctggaatgccttcttagaggctgttccaaaggatttaggacagtgattctaaacctgtgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctggaatgccttcttagaggctgttccaaaggatttaggacagtgattctaaacctgtgg 185
Query: 245 gtcacggcccctttgggagctgaacgactctttcccagcggtcagatatcagatattctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtcacggcccctttgggagctgaacgactctttcccagcggtcagatatcagatattctg 125
Query: 305 catatcaaacacttg 319
|||||||||||||||
Sbjct: 124 catatcaaacacttg 110
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_h17.g1 MSMg01no164_h17.g1 CHROMAT_FILE:
MSMg01no164_h17.g1 PHD_FILE: MSMg01no164_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:21 2005
(291 letters)
>mm_chr14_75663710_75664399
Length = 690
Score = 464 bits (240), Expect = e-135
Identities = 279/292 (95%), Gaps = 3/292 (1%)
Strand = Plus / Plus
Query: 1 catcctaagtaccagaaaatgaataacaaataatgtctgggctggagagatggctaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcctaagtaccagaaaatgaataacaaataatgtctgggctggagagatggctaagca 260
Query: 61 gttaagagcattgggtgagcttttcctgtaagcggtcagaggtgacctgtgaagatggct 120
|||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 261 gttaagagcactggctgagcttttcctgtaagcggccagaggtgacctgtgaagatgg-t 319
Query: 121 tg-ctactctcgtgacccagaaaaccccacaaagtcatgcaagtcaagaggttcaaacct 179
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 tcactactctcgtgacccagaaaaccccacaaagtcatgcaaatcaagaggttcaaacct 379
Query: 180 tcgaggtcactttaagaacacctggggaactgtccaggccatcaagggtatgcatatcct 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 tcgaggtcactttaagaacacctggggaaccgtccaggccatcaagggtatgcatatcct 439
Query: 240 caaagccaccttgtatctgaaggatgtcactttatttttgtttttgtgtttt 291
|||||||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 440 caaagccaccaagtatctgaaggacatcactttatttt-gtttttgtgtttt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
