Query= MSMg01no164_m23.b1 MSMg01no164_m23.b1 CHROMAT_FILE:
MSMg01no164_m23.b1 PHD_FILE: MSMg01no164_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:46 2005
(315 letters)
>mm_chr14_33231536_33232250
Length = 715
Score = 571 bits (295), Expect = e-167
Identities = 305/309 (98%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaggccatcctgggcaacttgatgagactctgtttcaaaataaaaaagttaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaggccatcctgggcaacttgatgagactctgtttcaaaataaaaaagttaaaa 266
Query: 65 aaaaaaaggactccccaaatagcttagtgctacagcacttgcctagcatgtgcaaaagcc 124
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaaa--ggactccccaaatagcttagtgctacagcacttgcctagcatgtgcaaaagcc 324
Query: 125 tggattaatcccagtgccataaaaataaataaaataaaaatgaataaaaacgggacgtgg 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggattaatcccagtgccgtaaaaataaataaaataaaaatgaataaaaacgggacgtgg 384
Query: 185 tagccttgccgagtcactgagcagttggcgctgctgaggaacggccactcaccatgactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagccttgccgagtcactgagcagttggcgctgctgaggaacggccactcaccatgactg 444
Query: 245 tgtactcagtttgggcctggatggctctctgcagcagctgcagtttctcagaagcctgtg 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtactcagtttgggcctggatggccctctgcagcagctgcagtttctcagaagcctgtg 504
Query: 305 aacaaagaa 313
|||||||||
Sbjct: 505 aacaaagaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_m23.g1 MSMg01no164_m23.g1 CHROMAT_FILE:
MSMg01no164_m23.g1 PHD_FILE: MSMg01no164_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:46 2005
(286 letters)
>mm_chr14_33382394_33383079
Length = 686
Score = 540 bits (279), Expect = e-158
Identities = 282/283 (99%)
Strand = Plus / Minus
Query: 4 tgcagctgattatgttaaatgacttaatgtaatacctgcaaaaatagcacttgtctcagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgcagctgattatgttaaatgacttaatgtaatacctgcaaaaatagcacttgtctcagt 427
Query: 64 gccctgggaggcgtcgggactggtcagagtgaacagctcatagagatcgttggatttgaa 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gccctgggaggcgtcaggactggtcagagtgaacagctcatagagatcgttggatttgaa 367
Query: 124 aaagcgcctttgttttgggtcttttagcactctgtttgtcaaaaattgcttgaagatttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aaagcgcctttgttttgggtcttttagcactctgtttgtcaaaaattgcttgaagatttg 307
Query: 184 tctaaaaagataaaatcacattgatatgaaacaatgtttacctgtacctcaaaatttcag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctaaaaagataaaatcacattgatatgaaacaatgtttacctgtacctcaaaatttcag 247
Query: 244 ttacaaaacatgagatggggctgaagagatggctcggtggtta 286
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttacaaaacatgagatggggctgaagagatggctcggtggtta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
