Query= MSMg01no164_n06.b1 MSMg01no164_n06.b1 CHROMAT_FILE:
MSMg01no164_n06.b1 PHD_FILE: MSMg01no164_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:47 2005
(317 letters)
>mm_chr14_13729507_13730221
Length = 715
Score = 553 bits (286), Expect = e-162
Identities = 305/312 (97%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 5 gaattccttaagcatagtagttaaaacttgaagcacaaatttagccctcacataacttta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaattccttaagcatagtagttaaaacttgaagcacaaatttagccctcacataacttta 314
Query: 65 aatatcactctccctgttcctgtgccatagcttcagagaaataagattgctttggtgttt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatatcactctccctgttcctgtgccatagcttcagagaaataagattgctttggtgttc 254
Query: 125 ccattaaccacagaaaattaataaaagtcaaaacttataactggacttgtaacagacctt 184
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 253 ccatcaaccacagaaaattaataaaagtcaaaact--taactggacttgtaacagacctt 196
Query: 185 taataccagtattccagagtcaaacacaggaggatcttcatggctttaaggctagcctgg 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 taatatcagtattccagagtcaaacacaggaggatcttcatggctttaaggctagcctgg 136
Query: 245 tctacatagtaagttccaggcatccacagttactaaacaaacaaaacttcaaaaccagcc 304
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 135 tctacatagtaagttccaggcatccacagttacaaaacaaac-aaacttcaaaaccagcc 77
Query: 305 aactaaccaacc 316
||||||||||||
Sbjct: 76 aactaaccaacc 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 715
Length adjustment: 9
Effective length of query: 308
Effective length of database: 706
Effective search space: 217448
Effective search space used: 217448
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_n06.g1 MSMg01no164_n06.g1 CHROMAT_FILE:
MSMg01no164_n06.g1 PHD_FILE: MSMg01no164_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:47 2005
(292 letters)
>mm_chr14_13581891_13582580
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 286/292 (97%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 ctacagttgaacagaagcaatcatgctaccttgtctttcgaagtgtacttacatggaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacagttgaacagaagcaatcatgctaccttgtctttcgaagtgtacttacatggaagc 260
Query: 61 agtctattctattaaggcaaacgatgaccgtcagggtgactcagcatgaccagagcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtctattctattaaggcaaacgatgaccgtcagggtgactcagcatgaccagagcacag 320
Query: 121 ggcacaggtggccaagcctcatctatactgcagactggtgttactgtgtgtggtccagca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ggcacaggtggccaagcctcatctatactgcagactggtgttaccgtgtgtggtccagca 380
Query: 181 ggtagtgaagctagattgaaacacacacacatgcactctccccgccccccccccacatag 240
||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||
Sbjct: 381 ggtagtgaagctagattgaaacacacaca--tgcactctccccgccccccacacacatag 438
Query: 241 acacaaacatttacagacacacacacacctgtaatacagcccctcttgcatt 292
||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acacaaacacttacagacacacacacacctgtaatacagcccctcttgcatt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
