XXXXXXXXXXXXXXXXXXXXXXXXTTGCGAGAATCCGCGGAATTCCTTCT
TCCTTCAGGCTGTGTCTTTTCTTTGAAGACCTTCAACTGACTGGATGAGG
CCCACCCAGACTGTGGGGGGCCTTCTGCCTTATTCAGAGTCTGCCTATGT
AAATCTGAGTTATAGCAGTAAAGGGGTCTTCCCGACCACCATCCAGGATA
GTGGTTGGTCAAACGAGTGGACAGATGCCACAGTTAGCCCCTAAGATGCC
ACAGGTTTCCTGGTCCTTAAAGGCCATGACATTCCTGTCTCACTTTCATG
GGTGACCCAGGCTCACTTCAAAGTAGATGCAAATCTCGCAAGTACCCTCT
AATTCTGTTGGGAAAATGTCCTAACATTCAACAGCTTTTCTTTTGTCCTC
AAGATTGCCAACAGGAGTAAGATGGGGAAAATCTCCCTGTAACAATGTTC
CCTGACTTTTATTCTTCACATGTACTAAATTTTTAAAATAAGGGCTTCTA
TTTGGAAAGTCTAGCGTGGTCCCTGAAGTTTTGCATTTATAGCAAGAACT
GAAGTGCGGTTGTCTCAGGGATCACATTGTAAGTAATGAGGTCTATAGGA
ACCCCAATAATATGCATGATACATATGATCCTGAGTGAACAGGGAAGCAG
GGCTTTGATGGTGCAGACCTGTAATCTCGGCACTGAGCTAAGAAAAGAAT
CATGAGTCTAAGTACAGCTTGTGCTATGGAAGATCCTTTCTCAAAAAAAT
A

NTTATCCTNNNNAAGGACGGAGNTGGCGGCGCTGGNGCTGAXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCTGGCTAGGACAGAACCCCCCTAA
TATNTCTNCAATTAACCACAGAGANCCCTCCCGGAAGCCTTCGNAATTTC
CTAGGTGATAGTTAACTTGTTAAAGTTGAACCTAAACAATTATAGAANAC
CATTTCTCCCCGATTGGGGAGGTGCAAGGTCTCACCTTGGAAATAGCAGA
AGGTAAAACTGGTGGAGGGATGGGAGGTGTCTGACTTCCCGCTCACTGCT
GGAGAGGACCTTGGTCTCAGTGAATGATAATCATTAAAAGATAGAGGTTG
ATCAAAAGGAGAATCCTTGTGCCCACAGCAGCATCCAAGGTATTCAAGAG
AAAGGCACAGCTAGACCACTGCCCTTTGGCCTACCAAAGCAGACCATGTC
TCCAAAGTAATGTGATTTCGTTTGCAGGAGGTGGAATTGGCGCCAGCCTC
CTCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCTCCCCCC
CCCCCCCCCCCTCCCCCCCCCCTCCCCTCCCCCCCCCCCCCCCCCTCCCC
CCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCTCCTC
CCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCC
CCTCCCCCCCCCATCCCCCCCTCCCCCCCCCCCTCCCTCCCCCCCTCCCC
CCCTTCCTCCCCCCTCCCCCCCCCCCCCTCCCACCCCTCCCCTCTCCCCC
CCCCCCCCCCCCCCCCCCCCCCTCCCCCTCCCCCTCCTCCTCCCCCCCCC
CCCCTCCCTCCCCCCCCCCCCTCCCCCTCCCCCCACCCCCCCTCCCCCCC
ACCCCTCCCCCCCCCCCCCTCCCCCCCCTCCTCCCCCCCCCCCCTCCTCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCACCCCC
CCCCTCCCCTCCCCCCCCCCCCCCCTCCCCCCCCTCCCCCCCCCCTCCCC
CTCCCCCCCCTCCCCCCCCTCCCCCTCCCCTCCCCTCCCCCTCCCCCCCC
CCCCTCCTTCCCCTCTCTTCCCCCTCCCCTCCCCCCCTCCT

Query= MSMg01no165_k16.b1 MSMg01no165_k16.b1 CHROMAT_FILE:
MSMg01no165_k16.b1 PHD_FILE: MSMg01no165_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:55 2005
         (657 letters)



>mm_chr14_29919393_29920449
          Length = 1057

 Score = 1156 bits (598), Expect = 0.0
 Identities = 637/650 (98%), Gaps = 1/650 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattccttcttccttc-aggctgtgtcttttctttgaagaccttcaactgactggatga 65
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gaatttcttcttccttcaaggctgtgtcttttctttgaagaccttcaactgactggatga 813

                                                                       
Query: 66  ggcccacccagactgtggggggccttctgccttattcagagtctgcctatgtaaatctga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ggcccacccagactgtggggggccttctgccttattcagagtctgcctatgtaaatctga 753

                                                                       
Query: 126 gttatagcagtaaaggggtcttcccgaccaccatccaggatagtggttggtcaaacgagt 185
           |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 752 gttatagcagtaaaggggtcttcccgaccaccatccagaatagtggctggtcaaacgagt 693

                                                                       
Query: 186 ggacagatgccacagttagcccctaagatgccacaggtttcctggtccttaaaggccatg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggacagatgccacagttagcccctaagatgccacaggtttcctggtccttaaaggccatg 633

                                                                       
Query: 246 acattcctgtctcactttcatgggtgacccaggctcacttcaaagtagatgcaaatctcg 305
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 632 acattcctgtctcactttcatgggggacccaggctcacttcaaagtagatgcaagtctcg 573

                                                                       
Query: 306 caagtaccctctaattctgttgggaaaatgtcctaacattcaacagcttttcttttgtcc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caagtaccctctaattctgttgggaaaatgtcctaacattcaacagcttttcttttgtcc 513

                                                                       
Query: 366 tcaagattgccaacaggagtaagatggggaaaatctccctgtaacaatgttccctgactt 425
           ||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 512 tcaagattgtcaataggggtaagatggggaaaatctccctgtaacaacgttccctgactt 453

                                                                       
Query: 426 ttattcttcacatgtactaaatttttaaaataagggcttctatttggaaagtctagcgtg 485
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttaatcttcacatgtactaaatttttaaaataagggcttctatttggaaagtctagcgtg 393

                                                                       
Query: 486 gtccctgaagttttgcatttatagcaagaactgaagtgcggttgtctcagggatcacatt 545
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 392 gtccctgaagttttgcatttatagcaagaactgaagtacggttgtctcagggatcacatt 333

                                                                       
Query: 546 gtaagtaatgaggtctataggaaccccaataatatgcatgatacatatgatcctgagtga 605
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 332 gtaagtaatgaggtctataggaaccccaataatatgcatgatacgtatgatcctgagtga 273

                                                             
Query: 606 acagggaagcagggctttgatggtgcagacctgtaatctcggcactgagc 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acagggaagcagggctttgatggtgcagacctgtaatctcggcactgagc 223


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)