Query= MSMg01no165_p20.b1 MSMg01no165_p20.b1 CHROMAT_FILE:
MSMg01no165_p20.b1 PHD_FILE: MSMg01no165_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:21 2005
(688 letters)
>mm_chr14_101274794_101275882
Length = 1089
Score = 1290 bits (667), Expect = 0.0
Identities = 679/683 (99%), Gaps = 1/683 (0%)
Strand = Plus / Plus
Query: 7 gaattcttccttccttccttaagctgttttgctaggtgttctgtcacagaaacaagaaga 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcttccttcctttcttaagctgttttgctaggtgttctgtcacagaaacaagaaga 266
Query: 67 aagactacaaaggtctttttgtgctttacacacgcatttttaaagaaatcctatgcaaat 126
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaactacaaaggtctttttgtgctttacacacgcatttttaaagaaatcctatgcaaat 326
Query: 127 tctactgcagcaaatgaattcattttataaaatattcacaggaacttgggttcttaaaca 186
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 327 tctactgcagcaaatgaattcattttataaaatcttcacaggaacttgggttcttaaaca 386
Query: 187 tcttgcagaatcctctaagtatatttatagtacaattcacttctctttaattcatttata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcttgcagaatcctctaagtatatttatagtacaattcacttctctttaattcatttata 446
Query: 247 gaaaaaaattagatcctcagtgacatattttcttaaactatatctattgcatcacatcct 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaaaaaaattagatcctcagtgacatattttcttaaactatatctattgcatcacatcct 506
Query: 307 atagtctcagacagggtatttatagtgcacataaccatgtaaagacttgggtatggattc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atagtctcagacagggtatttatagtgcacataaccatgtaaagacttgggtatggattc 566
Query: 367 tataatcatgcagtccatttcagaagtcaacaaagatgatgagaaacaggctatgtttgt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tataatcatgcagtccatttcagaagtcaacaaagatgatgagaaacaggctatgtttgt 626
Query: 427 gctactttcaaaaggatgctcacaatcctactctctggcctctggccctttctaattggt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gctactttcaaaaggatgctcacaatcctactctctggcctctggccctttctaattggt 686
Query: 487 gttgcatgtggagagtctctgcatgcctgtggctagagtcctgctccatcatgcttgtga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gttgcatgtggagagtctctgcatgcctgtggctagagtcctgctccatcatgcttgtga 746
Query: 547 tttaccactggatgtggagacagtcctgctccatcatgcttgtaattgtttggatgtttc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttaccactggatgtggagacagtcctgctccatcatgcttgtaattgtttggatgtttc 806
Query: 607 cttagaattagactttcaagtgtcctttgaataaaattttttt-cactctgtgtttgcta 665
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 807 cttagaattagactttcaagtgtcctttgaataaaattttttttcactctgtgtttgcta 866
Query: 666 ttgtacttttattttacaggaag 688
|||||||||||||||||||||||
Sbjct: 867 ttgtacttttattttacaggaag 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space: 731562
Effective search space used: 731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_p20.g1 MSMg01no165_p20.g1 CHROMAT_FILE:
MSMg01no165_p20.g1 PHD_FILE: MSMg01no165_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:21 2005
(634 letters)
>mm_chr14_101403649_101404682
Length = 1034
Score = 1149 bits (594), Expect = 0.0
Identities = 623/634 (98%), Gaps = 3/634 (0%)
Strand = Plus / Minus
Query: 1 ataatcacccaaacctcttagttaactttttagggcaaggtaagttttgttcttctgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ataatcacccaaacctcttagttaactttttagggcaaggtaagttttgttcttctgaga 892
Query: 61 actttttctttctttaaaaaaaaaaaactctaaaagatttattttaagtgtatattatat 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 actttttctttcttt---aaaaaaaaactctaaaagatttattttaagtgtatattatat 835
Query: 121 gtatgtgtatatttgtgagtgcagctgccctcgaggtcagaagtgagtgagtgttggaac 180
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 834 gtatgtgtatatttgtgagtgcaggtgccctcgaggccagaagtgagtgagtgttggaac 775
Query: 181 cttttgagatggaattatatgctattttcacttaactgctatgtgtcttaggaatgaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cttttgagatggaattatatgctattttcacttaactgctatgtgtcttaggaatgaggt 715
Query: 241 cccctgcaagaacaatcagcagtgttctctgtaaatctccagccgagagaggctttttct 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cccctgcaagaacaatcagcactgttctctgtaaatctccagccgagagaggctttttct 655
Query: 301 taatttgcaattatcactttgattggaacttaacactaacgatttcttccataaaccatc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 654 taatttgcaattatcactttgattggaacttaacactaacgatttctcccataaaccatc 595
Query: 361 ctgtctaacctctttcaatgttagttttgagtgaagaactacaaagtatgaagaagttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ctgtctaacctctttcaatgttagttttgagtgaagaactacaaagtatgaagaagttaa 535
Query: 421 ccagccagaggttgagcatcttacagggcatctcatcttatgaaatcagggaatcataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ccagccagaggttgagcatcttacagggcatctcatcttatgaaatcagggaatcataat 475
Query: 481 ttctcttgctatcatctgaatgtttttgtatctccaaaattaatatgcccaaccctaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 474 ttctcttgctatcatctgaatgtttttgtatctccaaaattaatatgcccaacccaaaat 415
Query: 541 tttagtgtgatagtttgtacgtgagaccatggatgggagagtcaagttactgaggtcaat 600
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct: 414 tttagtgtgatagtttgtacgtgagaccatggatgggagagtcatgttactggggttaat 355
Query: 601 cttttaaaacaggacaaaaggacacttttgcttc 634
||||||||||||||||||||||||||||||||||
Sbjct: 354 cttttaaaacaggacaaaaggacacttttgcttc 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
