Query= MSMg01no166_p09.b1 MSMg01no166_p09.b1 CHROMAT_FILE:
MSMg01no166_p09.b1 PHD_FILE: MSMg01no166_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:36 2005
(287 letters)
>mm_chr14_76775104_76775795
Length = 692
Score = 511 bits (264), Expect = e-149
Identities = 283/292 (96%), Gaps = 5/292 (1%)
Strand = Plus / Plus
Query: 1 cccattccttcccgattctcgaagacctcctgctgtccagagcatcacttctttcccacg 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 cccattccttcccgattctcgaagacctcctgctgtccagagcatcactcccttcccacg 260
Query: 61 catcttggagtcctttaccttccataaataatgacattgactctcttcttggctcctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcttggagtcctttaccttccataaataatgacattgactctcttcttggctcctatt 320
Query: 121 tgacactgggcctggccaacgccagctccctttctcctggaagtcaaggagactcctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacactgggcctggccaacgccagctccctttctcctggaagtcaaggagactcctccc 380
Query: 181 ttcctctccccccccc-----acgcccactcactcattcctgaagccacatcctctgact 235
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctctccccccccccccccacgcccactcactcattcctgaagccacatcctctgact 440
Query: 236 ctatcttcctcacttcatggagagagctcttgtcagtcaccatgtgtttcta 287
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatcttcctcacaccatggagagagctcttgtcagtcaccatgtgtttcta 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 692
Length adjustment: 9
Effective length of query: 278
Effective length of database: 683
Effective search space: 189874
Effective search space used: 189874
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no166_p09.g1 MSMg01no166_p09.g1 CHROMAT_FILE:
MSMg01no166_p09.g1 PHD_FILE: MSMg01no166_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:36 2005
(550 letters)
>mm_chr14_76936313_76937262
Length = 950
Score = 1017 bits (526), Expect = 0.0
Identities = 544/550 (98%)
Strand = Plus / Minus
Query: 1 ctgcctcactgccctttcttggcatgtctcttccctcctgtctagcctgccctccgcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ctgcctcactgccctttcttggcatgtctcttccctcctgtctagcctgccctccgcccc 691
Query: 61 actcctgcagcccattcgttaggctgttttctcagctttgctcgccctctgttaagttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 actcctgcagcccattcgttaggctgttttctcagctttgctcgccctctgttaagttat 631
Query: 121 taacttgtcagggtctagactccccagttcccctcctctttgatctcactgctggctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 taacttgtcagggtctagactccccagttcccctcctctttgatctcactgctggctccc 571
Query: 181 ttcctgtttgcagcatgggaagtcagccttcagagcaagggtcactcggcagggccgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttcctgtttgcagcatgggaagtcagccttcagagcaagggtcactcggcagggccgggt 511
Query: 241 tggcagtttcacggaatttcaagcaaaataattggtataaaatggagaaaactccttgaa 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tggcaggcacacggaatttcaagcaaaataattggtataaaatggagaaaactccttgaa 451
Query: 301 gccatcagtacaattggaataagaataataaacacccacacccccccaccatctcagatg 360
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 450 gccatcagtacaattggaataagaataataaacacccacatctcgccaccatctcagatg 391
Query: 361 tgaacttaaaatagacttcagtcatttctccaagagggagttgttctgtagacagattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgaacttaaaatagacttcagtcatttctccaagagggagttgttctgtagacagattaa 331
Query: 421 aagttacaaataattggcgtgctaactcaaggcttcagttaggatcagatatgactatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aagttacaaataattggcgtgctaactcaaggcttcagttaggatcagatatgactatca 271
Query: 481 aagaatattcaaataggtggattgttttaatatatgtcttggcccctccaagccttacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagaatattcaaataggtggattgttttaatatatgtcttggcccctccaagccttacca 211
Query: 541 actctgtcta 550
||||||||||
Sbjct: 210 actctgtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
