Query= MSMg01no168_c01.b1 MSMg01no168_c01.b1 CHROMAT_FILE:
MSMg01no168_c01.b1 PHD_FILE: MSMg01no168_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:07 2005
(330 letters)
>mm_chr14_22793415_22794144
Length = 730
Score = 588 bits (304), Expect = e-172
Identities = 322/332 (96%), Gaps = 8/332 (2%)
Strand = Plus / Plus
Query: 1 ctgtccctctatccctgcttgctcctcagcctcttagctccaagcctctgctgctcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtccctctatccctgcttgctcctcagcctcttagctccaagcctctgctgctcttcc 260
Query: 61 ccaa----ccccccaccctcttgcctcactctggaggttcctgaggagcagtgaggtgca 116
|||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaagtggcc----accctcttgcctcactctggaggttcctgaggagcagtgaggtgca 316
Query: 117 ctccatgggtcactgttgggtgggtgacagggcaggattagcaccacctccaccctgcta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctccatgggtcactgttgggtgggtgacagggcaggattagcaccacctccaccctgcta 376
Query: 177 tgatcagtgctttcatctgccttcttctgacttgtgttttgtttcctgaggtcacttcga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgatcagtgctttcatctgccttcttctgacttgtgttttgtttcctgaggtcacttcga 436
Query: 237 agtagagtcctggtaggccagtctgttgagtggtggtgggtctgttttttaggttcttat 296
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 437 agtagagtcctggtgggccagtctgttgagtggtggtgggtctgtgttttaggttcttat 496
Query: 297 caatgatatggaggaaggaggctgtgctggtc 328
||||||||||||||||||||||||||||||||
Sbjct: 497 caatgatatggaggaaggaggctgtgctggtc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_c01.g1 MSMg01no168_c01.g1 CHROMAT_FILE:
MSMg01no168_c01.g1 PHD_FILE: MSMg01no168_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:07 2005
(270 letters)
>mm_chr14_22941697_22942366
Length = 670
Score = 480 bits (248), Expect = e-140
Identities = 267/278 (96%), Gaps = 10/278 (3%)
Strand = Plus / Minus
Query: 1 aggacaggaagaaggatttatacacttgaagatgggtgaatggaaatgacccaaactagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aggacaggaagaaggatttatacacttgaagatgggtgaatggaaatgacccaaactagt 356
Query: 61 aactaggaggaaagtcaaaaataaagcaaggcacacaagagctacaaagtgaaataaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aactaggaggaaagtcaaaaataaagcaaggcacacaagagctacaaagtgaaataaagt 296
Query: 121 agtatacagtgtatatgaatgcaaagaatggaatagaacgagaagcaaggaaaaaacatc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agtatactgtgtatatgaatgcaaagaatggaatagaacgagaagcaaggaaaaaacatc 236
Query: 181 tgaggaaactaaatgacccccaaggtttatgtgga------gtgtgtgtgtgtgtgtgtg 234
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 235 tgaggaaactaaatgacccccaaggtttatgtggagtgtgtgtgtgtgtgtgtgtgtgtg 176
Query: 235 tgtgtgtgtgtgt--aagagagagagacagagagacag 270
||||||||||||| |||||||||||| |||||||||
Sbjct: 175 tgtgtgtgtgtgtgtaagagagagaga--gagagacag 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
