Query= MSMg01no168_f08.b1 MSMg01no168_f08.b1 CHROMAT_FILE:
MSMg01no168_f08.b1 PHD_FILE: MSMg01no168_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:29 2005
(270 letters)
>mm_chr14_32317133_32317803
Length = 671
Score = 485 bits (251), Expect = e-142
Identities = 263/267 (98%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtattaccatcaattctggagacagagtaggcattcttattggttt-ggggtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcagtattaccatcaattctggagacagagtaggcattcttattggtttgggggtt 264
Query: 64 cattgtgcttcctcgggaagcagggaggatagaagtcccctgcggcaattgggtcatctc 123
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 cattgtgcttccttgggaagcagggaggatagaagtcccctgcggcagttgggtcatctc 324
Query: 124 agctgtgtccttgcagagctgagggccgaggtggacattattgagcagatgagcagcagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctgtgtccttgcagagctgagggccgaggtggacattattgagcagatgagcagcagc 384
Query: 184 agtgggagtagctcctccgactctgagagctcctcgggaagtgacgacgacagctccagc 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgggagcagctcctccgactctgagagctcctcgggaagtgacgacgacagctccagc 444
Query: 244 agcgcaggcgaagacaatggcccagcc 270
|||||||||||||||||||||||||||
Sbjct: 445 agcgcaggcgaagacaatggcccagcc 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_f08.g1 MSMg01no168_f08.g1 CHROMAT_FILE:
MSMg01no168_f08.g1 PHD_FILE: MSMg01no168_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:30 2005
(282 letters)
>mm_chr14_32477052_32477733
Length = 682
Score = 528 bits (273), Expect = e-154
Identities = 279/281 (99%)
Strand = Plus / Minus
Query: 1 actgagccagtgctgggctgactccttaaattcccaccgttatctaatgcattaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 actgagccagtgctgggctgactccttaaattcccaccgttatctaatgcattaaataaa 551
Query: 61 taaaaaaaactgtactcattctgtatttgcatgagtcacacttttaacttcctgaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 taaaaaaaactgtactcattctgtatttgcatgagtcacacttttaacttcctgaaaatt 491
Query: 121 atatctggagagagcttttcctctcttcaggaaaataaaaaccttgaagggcatcttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atatctggagagagcttttcctctcttcaggaaaataaaaaccttgaagggcatcttata 431
Query: 181 gagcctgccacttcagttatgtctacacatcgaccacggtgcttcagcagtggtctggca 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gagcctgccacttcagttacgtctacacatcgaccacggtgcttcagcagtggtctggca 371
Query: 241 ggatatcaagaactcctgaagaatggagctcgccaaccccg 281
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggagatcaagaactcctgaagaatggagctcgccaaccccg 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
