Query= MSMg01no171_e09.b1 MSMg01no171_e09.b1 CHROMAT_FILE:
MSMg01no171_e09.b1 PHD_FILE: MSMg01no171_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:27 2005
(313 letters)
>mm_chr14_100285322_100286034
Length = 713
Score = 601 bits (311), Expect = e-176
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 3 cggaattccaaggatcctcctgtcctctgctctgttccatgctgggatcatatgccttta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cggaattccaaggatcctcctgtcctctgctctgttccatgctgggatcatatgccttta 262
Query: 63 agcatagctctttctctttttaattttcccttttttttttaaacctaggtcctagggaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcatagctctttctctttttaattttcccttttttttttaaacctaggtcctagggaat 322
Query: 123 cggcatccagtgcctctgagccacctctccaagcccctgtttgctgtttttttaaggaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cggcatccagtgcctctgagccacctctccaagcccctgtttgctgtttttttaaggaac 382
Query: 183 aagttacattgttcgggtaactggatgtccattccaatctttgcttttgaaaacatttta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagttacattgttcgggtaactggatgtccattccaatctttgcttttgaaaacatttta 442
Query: 243 agtacagaactgcctgggccaacgagaccaatctattgtatgtgatatcaatttatttgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agtacagaactgcctgggccaacgagaccaatctattgtatgtgatatcaatttatttgg 502
Query: 303 tcttggaaatg 313
|||||||||||
Sbjct: 503 tcttggaaatg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_e09.g1 MSMg01no171_e09.g1 CHROMAT_FILE:
MSMg01no171_e09.g1 PHD_FILE: MSMg01no171_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:27 2005
(280 letters)
>mm_chr14_100441759_100442436
Length = 678
Score = 499 bits (258), Expect = e-146
Identities = 274/280 (97%), Gaps = 2/280 (0%)
Strand = Plus / Minus
Query: 1 tcactctatattccaaattcatctccaataactctcaggctcatacgatgtgtcagcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcactctatattccaaattcatctccaataactctcaggctcatacgatgtgtcagcctc 419
Query: 61 ccaggttgtggggcccagattaacgagttttaatcttcaatactttaatttaaccaatag 120
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 418 ccaggttgtggggcccagtttaacgagttataatcttcaatactttaatttaaccaatag 359
Query: 121 aaatactttactgaggttttaaaccaaacactgaaaattttagaactatgcctttactaa 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 358 aaatactttactgaggttttaaaccaa--actgaaaattttagaactatgcctttactaa 301
Query: 181 taaaggataaaattatgacggtgacagtcattctcccttatagcttagttttggtgatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taaaggataaaattatgacggtgacagtcattctcccttatagcttagttttggtgatat 241
Query: 241 gatctagtagtgcttagagctatcagtcaaggtgagccat 280
|| |||||||||||||||||||||||||||||| ||||||
Sbjct: 240 gaactagtagtgcttagagctatcagtcaaggtaagccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 678
Length adjustment: 9
Effective length of query: 271
Effective length of database: 669
Effective search space: 181299
Effective search space used: 181299
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
