Query= MSMg01no171_k12.b1 MSMg01no171_k12.b1 CHROMAT_FILE:
MSMg01no171_k12.b1 PHD_FILE: MSMg01no171_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:55 2005
(176 letters)
>mm_chr14_40162935_40163510
Length = 576
Score = 319 bits (165), Expect = 5e-92
Identities = 171/173 (98%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 5 gaattcactgccacctcagttaaatggtacacaattcttttcttataaataatggcgaaa 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgccacctcagttaaatg-tacacaattcttttcttataaataatggcgaaa 263
Query: 65 caatgc-gctccttctctttcctcgatcattgaaaaacgcaaaagatttaaagggtagac 123
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caatgctgctccttctctttcctcgatcattgaaaaacgcaaaagatttaaagggtagac 323
Query: 124 agctggctgactttgtgccttctcttcactttgcagaatgcaataccttatga 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agctggctgactttgtgccttctcttcactttgcagaatgcaataccttatga 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no171_k12.g1 MSMg01no171_k12.g1 CHROMAT_FILE:
MSMg01no171_k12.g1 PHD_FILE: MSMg01no171_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:56 2005
(239 letters)
>mm_chr14_40213320_40213958
Length = 639
Score = 433 bits (224), Expect = e-126
Identities = 233/236 (98%)
Strand = Plus / Minus
Query: 1 agacaaacaaaaagcagaatgataacaacaaaaaacaaaggaaaaattctcaaaaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agacaaacaaaaagcagaatgataacaacaaaaaacaaaggaaaaattctcaaaaacatt 377
Query: 61 taaaaataattaaattgaatatcgacaaatagcaccagatggtgttacccaaaagaataa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 376 taaaaataattaaattgaatatcgacaaatagtaccagatggtgttacccaaaagaataa 317
Query: 121 atataagtagccaataaaaccaacaatcttatgatgaatatgcttttcaccagaaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atataagtagccaataaaaccaacaatcttatgatgaatatgcttttcaccagaaaatgc 257
Query: 181 caatcaagctacaagataatccaatcttaacttttttagaatggatattttcaaac 236
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 256 cagtcaagctacaagataatacaatcttaacttttttagaatggatattttcaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
