Query= MSMg01no172_l10.b1 MSMg01no172_l10.b1 CHROMAT_FILE:
MSMg01no172_l10.b1 PHD_FILE: MSMg01no172_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:14 2005
(472 letters)
>mm_chr14_119783478_119784354
Length = 877
Score = 849 bits (439), Expect = 0.0
Identities = 466/477 (97%), Gaps = 5/477 (1%)
Strand = Plus / Plus
Query: 1 gtgaggggcacctgtggccctgagctgtcccctattacaaag---tagctggtgcctttt 57
|||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||
Sbjct: 201 gtgaggggcacctgtggccctgagctgtcccctattacaaaggaatggctggtgtctttt 260
Query: 58 ttagttccttcttttgaggtgtctttcacgctggatgtttccacgtagtgaaggtcattg 117
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ttagttccttcttttgaggtgtctttcatgctggatgtttccacgtagtgaaggtcattg 320
Query: 118 cttgtggagagtgttggtctcctggagcgccatcactgtgacgagctgctgattagggta 177
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 cttgtggagagtgttggtctcctggagcgccatcactgtgtcgagctgctgattagggta 380
Query: 178 ttctatgaaggtctgctttgctcatagctagatgggaaatgttattacatgatctttctg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctatgaaggtctgctttgctcatagctagatgggaaatgttattacatgatctttctg 440
Query: 238 ctctctcctactactgtcttgcccacatataaataataagagtgtttttctcccctgttg 297
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctctcctactactggcttgcccacatataaataataagagtgtttttctcccctgttg 500
Query: 298 tctgagaatcagacttgaacaaaagtaacagagcgcgatcatattttccagtaaagttat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgagaatcagacttgaacaaaagtaacagagcgcgatcatattttccagtaaagttat 560
Query: 358 tttcagggttcatattgaaaaaaaa--catttgggtttgtagtgatctctcccacagcac 415
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 tttcagggttcatattgaaaaaaaaaacatttgggtttgtagtgatctctcccacagcac 620
Query: 416 agattaaatcatctctggtgacacacattgggacaaggcgttttgggaacatttcgc 472
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 agattaaatcatctctggtgacacacattgggacaaggggttttgggaacatttcgc 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 877
Length adjustment: 10
Effective length of query: 462
Effective length of database: 867
Effective search space: 400554
Effective search space used: 400554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_l10.g1 MSMg01no172_l10.g1 CHROMAT_FILE:
MSMg01no172_l10.g1 PHD_FILE: MSMg01no172_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:14 2005
(248 letters)
>mm_chr14_119931039_119931684
Length = 646
Score = 455 bits (235), Expect = e-132
Identities = 242/245 (98%), Gaps = 2/245 (0%)
Strand = Plus / Minus
Query: 1 aagaaatctccatttcttatcaacatcccaaatcctttgttataaaatttaaaaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aagaaatctccatttcttatcaacatcccaaatcctttgttataaaatttaaaaattaaa 454
Query: 61 tatttaaattgaaaaagatctttttgatataaattagtattttcctttcaagtgaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tatttaaattgaaaaagatctttttgatataaattagtattttcctttcaagtgaatctg 394
Query: 121 aaccacttcagttctcttttaaattgtggggtttttttttgtgtgtgtgtgtttatttat 180
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 393 aaccacttcagttctcttttaaattgtggggttcttttttgtgtgtgtgt--ttatttat 336
Query: 181 ttatatacatgcacaagtgcaaggtacatgtgtagatgttagagaataactttcagtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttatatacatgcacaagtgcaaggtacatgtgtagatgttagagaataactttcagtatc 276
Query: 241 aggtt 245
|||||
Sbjct: 275 aggtt 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 646
Length adjustment: 9
Effective length of query: 239
Effective length of database: 637
Effective search space: 152243
Effective search space used: 152243
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
