Query= MSMg01no175_a06.b1 MSMg01no175_a06.b1 CHROMAT_FILE:
MSMg01no175_a06.b1 PHD_FILE: MSMg01no175_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:00 2005
(583 letters)
>mm_chr14_21689866_21690846
Length = 981
Score = 891 bits (461), Expect = 0.0
Identities = 524/549 (95%), Gaps = 12/549 (2%)
Strand = Plus / Minus
Query: 1 cacacatattgcacatacatataggcagactaaacacccataactataaaataca-taaa 59
|||||||||||||||||||||||||| | ||||||||||||| |||||||||| | ||||
Sbjct: 542 cacacatattgcacatacatataggc-g-ctaaacacccatacctataaaata-agtaaa 486
Query: 60 tctacatttttaaaacatttgtaagaaaacaacaataacgtatttatttccaaaacattg 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 485 tctacatttttaaaacatttgtaagaaaacaacaataacatatttatttccaaaacattg 426
Query: 120 ttttttatgtccttccttttcacctggtgcctgcctgccataactccccagccagatatg 179
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 425 ttatttatgtccttccttttcacctagtgcctgcctgccataactccccagccagatata 366
Query: 180 caggctccatttaacaatcttaggtactcagcttctccctacttcttcagccaccaggat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 caggctccatttaacaatcttaggtactcagcttctccctacttcttcagccaccaggat 306
Query: 240 attctcctcatctaatcaacacaggagagggcaaagggtagtgtttgactgtgtagatgc 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attcacctcatctaatcaacacaggagagggcaaagggtagtgtttgactgtgtagatgc 246
Query: 300 agatatactcaaaggtccgtgaaatttgggctagacataactccacccc----aaatcac 355
||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 245 agatatactcaaaggtctgtgaaatttgggctagacataactcca----tggtagatcac 190
Query: 356 ttgtctagcatgcataagaccctgggttccatccctggtaccccaagagaataaaacaaa 415
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 189 ttgtctagcatgcataagaccctggattctatccctggtaccccaagagaataaaacaaa 130
Query: 416 agaggcccattagtctttctagatgtttagggaaaaacacccagtgcaagttcaccatca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agaggcccattagtctttctagatgtttagggaaaaacacccagtgcaagttcaccatca 70
Query: 476 tatccagtgtcatgctccagaaaggcctaaaaattaaaataattataaagtagaataaag 535
|||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 69 tatccagtgtcacgctccagaaaggcctaaaaattaaaataattataatgcagaataaag 10
Query: 536 ttgatatct 544
|||||||||
Sbjct: 9 ttgatatct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 981
Length adjustment: 10
Effective length of query: 573
Effective length of database: 971
Effective search space: 556383
Effective search space used: 556383
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_a06.g1 MSMg01no175_a06.g1 CHROMAT_FILE:
MSMg01no175_a06.g1 PHD_FILE: MSMg01no175_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:00 2005
(286 letters)
>mm_chr14_21605079_21605764
Length = 686
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Plus
Query: 1 caatctcaatgacatctttccctctgaaatctctgcctgtggcctcaccatcagctgtga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 caatctcaatgacatctttccctctgaaatctctgcctgtggcctcaacatcagctgtga 260
Query: 61 gaagcccccggcagccccaggtggaggcagtcttctcttactcccctcctgagtgcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagcccccggcagccccaggtggaggcagtcttctcttactcccctcctgagtgcccca 320
Query: 121 ccttccctcacacacagctgaaaccctgctccttgggcctcactctgagaaacaggaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ccttccctcacacacagctgaaaccctgctccttgggcctcactctgaggaacaggaaca 380
Query: 181 agggcagcacagggctgtcgtgtcatagtccaccttcctctgctgcttctacacagcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggcagcacagggctgtcgtgtcatagtccaccttcctctgctgcttctacacagcatc 440
Query: 241 accccttgggcaccaatgagtgaggatctccagccacaatccca 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accccttgggcaccaatgagtgaggatctccagccacaatccca 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
