Query= MSMg01no176_a19.b1 MSMg01no176_a19.b1 CHROMAT_FILE:
MSMg01no176_a19.b1 PHD_FILE: MSMg01no176_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:19 2005
(688 letters)
>mm_chr14_28797495_28798583
Length = 1089
Score = 1249 bits (646), Expect = 0.0
Identities = 678/693 (97%), Gaps = 9/693 (1%)
Strand = Plus / Minus
Query: 1 agtctcgtaaatttattattaatgccgagtcagtaatcttcacttgcctgctcaattctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 agtctcgtaaatttattattaatgccgagtcagtaatcttcacttgcctgctcaattctt 830
Query: 61 cccagccatggtctttatcttgaggaatttgagttgcttgttgccactgacatcttctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 cccagccatggtctttatcttgaggaatttgagttgcttgttgccactgacatcttctat 770
Query: 121 attcctcaagcccttatttccagttaggaaaaggcaggtccagaaagatagctcatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 attcctcaagcccttatttccagttaggaaaaggcaggtccagaaagatagctcatgagc 710
Query: 181 tgcaggcactactgtatataaataacaattggaacaagcagatgctacacaggagtttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgcaggcactactgtatataaataacaattggaacaagcagatgctacacaggagtttgc 650
Query: 241 caaaagatgtctgagcaaattagcacctcctgtggactata----attttatttcaattg 296
||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 649 caaaagatgtctgagcaaattagcacctcctgtggactataaggca----atttcaattg 594
Query: 297 ctacaatcgatgttcatgatgtccctgcagtttagcactgggatggtgctttgggtgttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctacaatcgatgttcatgatgtccctgcagtttagcactgggatggtgctttgggtgttt 534
Query: 357 tccttatctggaattattcattttgtaagcactgtagacagtacttttctgtctccttcg 416
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 533 tccttatctggaattattcattttgtaagcactgtagacagtacttttctgactccttcg 474
Query: 417 cgctctgcattaatctgtgctgacactctaactaggtgacttatctaacagcaaactaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cgctctgcattaatctgtgctgacactctaactaggtgacttatctaacagcaaactaat 414
Query: 477 tcatcaagcatcataacatctagctcagtctgcttggttcccacatccttgattatggag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcatcaagcatcataacatctagctcagtctgcttggttcccacatccttgattatggag 354
Query: 537 actataaaagattcaaaagatggattcaaagacgaattattcanagaaaaatgtttagct 596
|||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 353 actataaaagattcaaaagatggattaaaagatgaattattcaaagaaaaatgtttagct 294
Query: 597 taaaattctaaataaagttcttgtgctattgaattgaaaaaaa-tgtataagccacagag 655
||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct: 293 taaaattctaaataaagttcttgtggtattgaattgaaaaaaaatgtataagcctcagag 234
Query: 656 aaatgcacaacaaatgtttgaattacaaacgta 688
|||||||||||||||||||||||||||||||||
Sbjct: 233 aaatgcacaacaaatgtttgaattacaaacgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space: 731562
Effective search space used: 731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_a19.g1 MSMg01no176_a19.g1 CHROMAT_FILE:
MSMg01no176_a19.g1 PHD_FILE: MSMg01no176_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:19 2005
(334 letters)
>mm_chr14_28633256_28633989
Length = 734
Score = 530 bits (274), Expect = e-155
Identities = 326/358 (91%), Gaps = 24/358 (6%)
Strand = Plus / Plus
Query: 1 tttgagttcacacaaaagcccttgacagaggacgaacatcccacccatgttcatgtcact 60
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 177 tttgagttcacacaaaagcccttgacagaggacgaacgtcccacccacgttcatgtcact 236
Query: 61 tcatcaccttctacttttagccatttagtcagtttctctgcatcaagaaaattatctaag 120
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tcatcacattctacttttagctatttagtcagtttctctgcatcaagaaaattatctaag 296
Query: 121 atgtataagacatgagacagacagaaagggtgatatatat-------------------- 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgtataagacatgagacagacagaaagggtgatatatatatatatatatatatatatat 356
Query: 161 ---t-tatatatatatttttttcttttttcttttccttgctgctactctatcttaggaat 216
| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atatatatatatatatatatttcttttttcttttccttgctgctactctatcttaggaat 416
Query: 217 agctgagtttgcaaagaggctttctaagagtcagaacgagcagttcctgtcctgaggttg 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agctgagtttgcaaagaggctttctaagagtcagaacgagcagttcctgtcctgaggttg 476
Query: 277 ttgttaaatccctataaggaaagagatccattcaaaagtagttgtaggcctgataatg 334
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 477 ttgttaaatccctataaggaaagagatccattcaaaagtagtcgcaggcctgataatg 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
