Query= MSMg01no176_f06.b1 MSMg01no176_f06.b1 CHROMAT_FILE:
MSMg01no176_f06.b1 PHD_FILE: MSMg01no176_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:56 2005
(323 letters)
>mm_chr14_70221005_70221727
Length = 723
Score = 397 bits (205), Expect = e-115
Identities = 271/323 (83%), Gaps = 46/323 (14%)
Strand = Plus / Plus
Query: 1 gatagaacccatgaccttgctcatgctgggcaagtttctaccaccgagacacatttccat 60
||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 201 gatagaacccaggaccttgctcatgctgggcaagtttctaccactgagatacatttccat 260
Query: 61 ccctggcactgcctgttagaggtaaagtctggtcactttccctctttcaggcaggaaaca 120
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ccctggcactgcctgttagagttaaagtctggtcactttccctctttaaggcaggaaaca 320
Query: 121 aaaacatagtctacagctacgatcaaatgttttctttgtgttttttttttctttccattt 180
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 aaaacatagtctacagctatgatcaaatgttttctttgtgttt----------------- 363
Query: 181 tttattaggtatttgttttctttgtgtttaactagagttaaaccaacagactcaaaaatt 240
|||||||||||||||||||||||||||||||
Sbjct: 364 -----------------------------aactagagttaaaccaacagactcaaaaatt 394
Query: 241 tttgccactttcaaaaatctatcccactcttaaaaattgtgtgtatacttgagtatgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttgccactttcaaaaatctatcccactcttaaaaattgtgtgtatacttgagtatgtgt 454
Query: 301 gtactgcgtgagtgcagtgtgcc 323
|||||||||||||||||||||||
Sbjct: 455 gtactgcgtgagtgcagtgtgcc 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_f06.g1 MSMg01no176_f06.g1 CHROMAT_FILE:
MSMg01no176_f06.g1 PHD_FILE: MSMg01no176_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:57 2005
(323 letters)
>mm_chr14_70390538_70391260
Length = 723
Score = 576 bits (298), Expect = e-169
Identities = 316/322 (98%)
Strand = Plus / Minus
Query: 1 gggctcaaagatgaggtcttatcagaattccagactgaagaagatagctccgggggaagg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gggctcaaagctgaggtcttatcagaattccagactgaagaagatagctccgggggaagg 463
Query: 61 gcaaaggggtgggatattttggaacttgtctgcctggccacagaaactgttctttagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcaaaggggtgggatattttggaacttgtctgcctggccacagaaactgttctttagggg 403
Query: 121 aggaaaactgagaaggacgccaagtggcagaggcaagatgaccagaaagtacagctgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aggaaaactgagaaggacgccaagtggcagaggcaagatgaccagaaagtacagctgact 343
Query: 181 ctaatggcccggactctgtcccttggtagaagatgaatgaacctagaaacccagtgccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctaatggcccggactctgtcccttggtagaagatgaatgaacctagaaacccagtgccct 283
Query: 241 ccatgaaaataaagacactaggtaggaggttttttcctgggagtttggcatggaggatgt 300
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 282 ccatgaaaataaagacactaggtaggaggcagtgtcctgggagtttggcatagaggatgt 223
Query: 301 tatctatcagtgagtgctaaca 322
||||||||||||||||||||||
Sbjct: 222 tatctatcagtgagtgctaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
