Query= MSMg01no180_d08.b1 MSMg01no180_d08.b1 CHROMAT_FILE:
MSMg01no180_d08.b1 PHD_FILE: MSMg01no180_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:23 2005
(350 letters)
>mm_chr14_41631268_41632017
Length = 750
Score = 642 bits (332), Expect = 0.0
Identities = 343/350 (98%), Gaps = 6/350 (1%)
Strand = Plus / Minus
Query: 1 gcaacaataataccaccaccaccaccaccacctgccacccaaaatcaaagttaaagaaga 60
||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 576 gcaacaataat------accaccaccaccacctgccacccaaaatcagagttaaagaaga 523
Query: 61 agagaagaaaggacagaagagaaaactattcattcagagatgcctgggctcagagtactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agagaagaaaggacagaagagaaaactattcattcagagatgcctgggctcagagtactg 463
Query: 121 ctgtggatctggactaggtgagggtggattcctatttgttttgggaagggccttctaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ctgtggatctggactaggtgagggtggattcctatttgttttgggaagggccttctaaca 403
Query: 181 gccagaggaaggcagaagaagaaagaaggaaggaagggagtgtggagtctgatagcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gccagaggaaggcagaagaagaaagaaggaaggaagggagtgtggagtctgatagcattg 343
Query: 241 ttctgggttaagcatacatgtcctcacaatcatggtgacatctgtgttatgaaagcacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttctgggttaagcatacatgtcctcacaatcatggtgacatctgtgttatgaaagcacaa 283
Query: 301 taaccatgttcacaggccaggaaaccaaggccagggaggccacagcactg 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taaccatgttcacaggccaggaaaccaaggccagggaggccacagcactg 233
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_d08.g1 MSMg01no180_d08.g1 CHROMAT_FILE:
MSMg01no180_d08.g1 PHD_FILE: MSMg01no180_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:24 2005
(291 letters)
>mm_chr14_41521292_41521981
Length = 690
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 cagaatgtgtaaatgaggactttcttcaatagcagaaggtgggcgctgcacgtataagtg 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 cagaatgtgtaaatgaggactttcttcaatagcagaaggtgggcgctg-aggtataagtg 259
Query: 61 aagcaaagggaagagacgagcatggagtcagaactattccagaaatcaagaaagcctaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aagcaaagggaagagacgagcatggagtcagaactattccagaaatcaagaaagcctaga 319
Query: 121 gacagcggagcttgagcacaagataggcactgcagactttataagccttatatcaacaca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacagtggagcttgagcacaagataggcactgcagactttataagccttatatcaacaca 379
Query: 181 ttagaacttggacaaggaagtctcactggacccaaagggatgcatgatagttctttgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttagaacttggacaaggaagtctcactggacccaaagggatgcatgatagttctttgcct 439
Query: 241 tattgagtgggcatgagagaacaatttctgattccttcatagattccctta 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tattgagtgggcatgagagaacaatttctgattccttcatagattccctta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
