Query= MSMg01no180_e13.b1 MSMg01no180_e13.b1 CHROMAT_FILE:
MSMg01no180_e13.b1 PHD_FILE: MSMg01no180_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:29 2005
(492 letters)
>mm_chr14_73782253_73783139
Length = 887
Score = 808 bits (418), Expect = 0.0
Identities = 469/488 (96%), Gaps = 5/488 (1%)
Strand = Plus / Minus
Query: 5 gaattctttttcctgccataagctggaagccttttctcagtggggacagtatctctacaa 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaattctttttccagctataagctggaagccttttctcagtggggacagtatctctacaa 628
Query: 65 tgggagtatttgccctaaaggaaaagcctgcttgcctagcgagagaactgatctcatccc 124
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgggagtaggtggaataaaggaaaagcctgcttgcctagcgagagaactgatctcatccc 568
Query: 125 agagctgcggagtgattacataatgttctgatgttcctttgggctgcactgtgtggcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agagctgcggagtgattacataatgttctgatgttcctttgggctgcactgtgtggca-- 510
Query: 185 ggaacatccttgtccgaccgcccgggctgggaacagaattagccttaatgtgttctgcct 244
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 --acca-ccttgtccgaccgcccgggctgggaacagaattagccttaatgtgttctgcct 453
Query: 245 ggggcatttcctctggtcaagaggaccaagctggtttgagaacttggaaagaaagccctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggggcatttcctctggtcaagaggaccaagctggtttgagaacttggaaagaaagccctt 393
Query: 305 tagcacttttacacagcagccacggacctgtttgtacagcctgtgcttgaggagtgcccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tagcacttttacacagcagccacggacctgtttgtacagcctgtgcttgaggagtgcccc 333
Query: 365 atgggcacccgcaagaattctgctgtctcctgtcaggggcttatgtaacatacgtacaca 424
|||| | | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gtgggtatctgtaagaattctgctgtctcctgtcaggggcttatgtaacatacgtacaca 273
Query: 425 gggccatttataccgctgtcttctgctgctgtctcccaccctgcatgagacccttctgga 484
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gggccatttacaccgctgtcttctgctgctgtctcccaccctgcatgagacccttctgga 213
Query: 485 agcagccc 492
||||||||
Sbjct: 212 agcagccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 887
Length adjustment: 10
Effective length of query: 482
Effective length of database: 877
Effective search space: 422714
Effective search space used: 422714
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_e13.g1 MSMg01no180_e13.g1 CHROMAT_FILE:
MSMg01no180_e13.g1 PHD_FILE: MSMg01no180_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:29 2005
(287 letters)
>mm_chr14_73634487_73635173
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Plus
Query: 1 aaggaatctgaagcaaataaaaagcaggaagggaactttgtagagcctaattcctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggaatctgaagcaaataaaaagcaggaagggaactttgtagagcctaattcctttctt 260
Query: 61 ttacagccaagaagccagagtccccacaggagcaaaggaaaaggactgaaaaggacaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacagccaagaagccagagtccccacaggagcaaaggaaaaggactgaaaaggacaagc 320
Query: 121 agagttctctgctgggagctctttgcactgcattttcctactccccaacccccttagaaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 agagttctctgctgggagctctttgcactgcattttcctactccccgacccccttagaaa 380
Query: 181 aagatgtatagtctctttttattgcctacagcacatgctttattcatgcataaagaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagatgtatagtctctttttattgcctacagcacatgctttattcatgcataaagaatct 440
Query: 241 acactagtaaaagacagtctagattccttctagatttttctatagag 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acactagtaaaagacagtctagattccttctagatttttctatagag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
