Query= MSMg01no180_g14.b1 MSMg01no180_g14.b1 CHROMAT_FILE:
MSMg01no180_g14.b1 PHD_FILE: MSMg01no180_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:38 2005
(635 letters)
>mm_chr14_112939449_112940483
Length = 1035
Score = 1154 bits (597), Expect = 0.0
Identities = 624/635 (98%), Gaps = 4/635 (0%)
Strand = Plus / Plus
Query: 1 aggacatgaatgcactgcttgcctttatctttgataaaacaatgtgacataccgcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aggacatgaatgcactgcttgcctttatctttgataaaacaatgtgacatattgcatgta 260
Query: 61 aatttacatattatatttctcattttattctatgaagaattttttaatttagacacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttacatattatatttctcattttattctatgaagaattttttaatttagacacttaa 320
Query: 121 attcatgttttaaaggagtcaagaattaaccttaagtaacaggaatattgctagcaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcatgttttaaaggagtcaagaattaaccttaagtaacaggaatattgctagcaaggt 380
Query: 181 ataatatgcaatcaatgataaatttaagaatctatatgtttctttgctatactgacacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataatatgcaatcaatgataaatttaagaatctatatgtttctttgctatactgacacta 440
Query: 241 gaagacaattgtatcagtgaacagtagtgttgaaattataaatttcaataatttgctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagacaattgtatcagtgaacagtagtgttgaaattataaatttcaataatttgctttt 500
Query: 301 ttaaacttggctttcaattctaattttagttctatttcctactgagacaaattgacaagt 360
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaactttgctctcaattctaattttagttctatttcctactgagacaaattgacaagt 560
Query: 361 gccaacaatttcctatataatttattatagataatattttatttcaattgcttttagaag 420
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gccaacaatttcccatataatttattacagataatattttatttcaattgcttttagaag 620
Query: 421 gaaaaggaggcaaaaatatcaagagtgattaagcataatcaaataaatgttttaacagca 480
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 gaaaaggaggcaaaaatatcaagagtgattaagcataatcaaat----gttttaacagca 676
Query: 481 accttgtcttatcagcatgtgtttataatattttattaatatttcatagaaatattattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 accttgtcttatcagcatgtgtttataatattttattaatatttcatagaaatattattt 736
Query: 541 ttgaagtaaggagatacatttaatataaatgtatacagattgacaatttatataattttt 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttgaagtaaggagatacattttatataaatgtatacagattgacaatttatataattttt 796
Query: 601 aaatcacattatggaaggagactatataactacct 635
|||||||||||||||||||||||||||||||||||
Sbjct: 797 aaatcacattatggaaggagactatataactacct 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_g14.g1 MSMg01no180_g14.g1 CHROMAT_FILE:
MSMg01no180_g14.g1 PHD_FILE: MSMg01no180_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:38 2005
(289 letters)
>mm_chr14_113092453_113093141
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 aaacctggtccactggtagaatagccaagccccttaaaattctgacaccactcaaaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 489 aaacctggtccactggtagaatagccaagccccttaaaattctgacatcactcaaaaacc 430
Query: 61 aatgaaaaatatcatccatatcttctgacactatacttttttttataattatagctattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatgaaaaatatcatccatatcttctgacactatacttttttttataattatagctattg 370
Query: 121 tggaatataaaatttctgacatacaagcagtttttatttctcaactacatagtctttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tggaatataaaatttctgacatacaagcagtttttatttctcaactacatagtctttaat 310
Query: 181 cattgttacttttgtttccacaaagaagaacaataaatgttgatggttgataagtcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cattgttacttttgtttccacaaagaagaacaataaatgttgatggttgataagtcactg 250
Query: 241 tatcaggattatcataaagatagtgtgctagtgccaaatgtaaatcaat 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatcaggattatcataaagatagtgtgctagtgccaaatgtaaatcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
