Query= MSMg01no180_g24.b1 MSMg01no180_g24.b1 CHROMAT_FILE:
MSMg01no180_g24.b1 PHD_FILE: MSMg01no180_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:40 2005
(624 letters)
>mm_chr14_32890859_32891882
Length = 1024
Score = 1122 bits (580), Expect = 0.0
Identities = 610/626 (97%), Gaps = 12/626 (1%)
Strand = Plus / Plus
Query: 7 gaattccaggacagccagccctatacagagaatacagagaaaccccgtctcggaaaaaaa 66
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccaggacagccagggctatacagagaatacagagaaaccccgtctcggaaaaaaa 262
Query: 67 aaaaaggaaaaaaaaa--------aaaaaaagcaagctgtaaatggtggcctttaatccc 118
||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaaaa--aaaaaaaaaggaaaaaaaaaaaaagcaagctgtaaatggtggcctttaatccc 320
Query: 119 agcacccaggaggcattggaatgcagatatctgtgagttccaggctagccagggctatac 178
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 agcacccaggaggcattggaatgcagat--ctgtgagttccaggctagccagggctatac 378
Query: 179 agtgaggccttgtctcaagagaaaaccccaaattcctccccctattcccacactccccac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agtgaggccttgtctcaagagaaaaccccaaattcctccccctattcccacactccccac 438
Query: 239 accccactcccatgtatattaggattagctcttataaacagcaacaaaatgttttctgct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 accccactcccatgtatattaggattagctcttataaacagcaacaaaatgttttctgct 498
Query: 299 tagtgattgactggataccatttatccatttgggggtaactaataacatttgatacttta 358
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tattgattgactggataccatttatccatttgggggtaactaataacatttgatacttta 558
Query: 359 ccaaacagaaaggtctccttcatgtccaacttaattaatgtttgctgtctccaaccccac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ccaaacagaaaggtctccttcatgtccaacttaattaatgtttgctgtctccaaccccac 618
Query: 419 aactcagcatggagaacacttagccaaggtcctgacagcaccccattccacttcaaggga 478
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aactcagcgtggagaacacttagccaaggtcctgacagcaccccattccacttcaaggga 678
Query: 479 gatgatgagcatcaataacctccatatagagttgctccaattgtggcaagctagccactg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gatgatgagcatcaataacctccatatagagttgctccaattgtggcaagctagccactg 738
Query: 539 cggggaaatgtcccaattttatctgcagacagaatgctgtccaaaaagcacaaagagaca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cggggaaatgtcccaattttatctgcagacagaatgctgtccaaaaagcacaaagagaca 798
Query: 599 taggatagtcgattgctaagctctgc 624
||||||||||||||||||||||||||
Sbjct: 799 taggatagtcgattgctaagctctgc 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_g24.g1 MSMg01no180_g24.g1 CHROMAT_FILE:
MSMg01no180_g24.g1 PHD_FILE: MSMg01no180_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:40 2005
(448 letters)
>mm_chr14_33057429_33058276
Length = 848
Score = 750 bits (388), Expect = 0.0
Identities = 423/448 (94%), Gaps = 21/448 (4%)
Strand = Plus / Minus
Query: 1 tacgacttttctcatctccagagagagagagagagagagagagagatagaccccagagag 60
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 533 tacgacttttctcatctccagagagagagagag---------------------agagag 495
Query: 61 agagagagagagagagagagagagagagagagaagcactttataattataaaagacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agagagagagagagagagagagagagagagagaagcactttataattataaaagacttaa 435
Query: 121 cacaaggcctttagaattaacattatggtactgtacagaactattaatacacttctccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cacaaggcctttagaattaacattatggtactgtacagaactattaatacacttctccac 375
Query: 181 tgacatacagagcttagaaatgctacccatataaaataagttgcattaaaaacaatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgacatacagagcttagaaatgctacccatataaaataagttgcattaaaaacaatgaga 315
Query: 241 aacctatggcccatatcttaatctctaaataaaaagaatcaagaacccttaaatatctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 314 aacctatggcccatatcttaatctctaaataaaaagaatcaagaacccttaaataacagt 255
Query: 301 tgatccgagccctggggaatgaataatataaacctagaacattttatgactctcaaggga 360
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgatccgagggctggggaatgaataatataaacctagaacattttatgactctcaaggga 195
Query: 361 aaaaaatgtgcaaaaagatgatggaattttgttaaaagtataaaaggccatttcttaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aaaaaatgtgcaaaaagatgatggaattttgttaaaagtataaaaggccatttcttaata 135
Query: 421 ggctcaatggtcaaagaaaactataaat 448
||||||||||||||||||||||||||||
Sbjct: 134 ggctcaatggtcaaagaaaactataaat 107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
