Query= MSMg01no182_k11.b1 MSMg01no182_k11.b1 CHROMAT_FILE:
MSMg01no182_k11.b1 PHD_FILE: MSMg01no182_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:27 2005
(369 letters)
>mm_chr14_85484752_85485520
Length = 769
Score = 652 bits (337), Expect = 0.0
Identities = 358/365 (98%)
Strand = Plus / Minus
Query: 5 gaattcaagtattattcccaatgtctcttccataatagtattcatctacttactgtagaa 64
||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaattcaagtattatacttactgtctcttccataatagtattcatctacttactgtagaa 510
Query: 65 aagaacatttgtctaccgtgaatattttccatcaggctttaggtctgcaaagtagctttg 124
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagaacatttgtctacagtgtatattttccatcaggctttaggtctgcaaagtagctttg 450
Query: 125 taaataattataagctataattactaattagatttcacttctgtttctttactctaagta 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 449 taaataattataagctataattactaattaggtttcacttctgtttctttactctaagta 390
Query: 185 gattccttaatccccattttctcagtggaaatctaaaatgccaaagtgattttcccccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gattccttaatccccattttctcagtggaaatctaaaatgccaaagtgattttcccccaa 330
Query: 245 ggtttacttttattaataataaatcagagataaagctcacaattaaagaataacttccat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggtttacttttattaataataaatcagagataaagctcacaattaaagaataacttccat 270
Query: 305 acttatactcagtgcaaaatacaatataattaggtatacatatataaatttatatttctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 acttatactcagtgcaaaatacaatataattaggtatacatatataaatttatatttctc 210
Query: 365 ctttc 369
|||||
Sbjct: 209 ctttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_k11.g1 MSMg01no182_k11.g1 CHROMAT_FILE:
MSMg01no182_k11.g1 PHD_FILE: MSMg01no182_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:27 2005
(559 letters)
>mm_chr14_85376342_85377300
Length = 959
Score = 1042 bits (539), Expect = 0.0
Identities = 554/559 (99%), Gaps = 1/559 (0%)
Strand = Plus / Plus
Query: 1 tggcatgaaaggaagcagcaaaatcacattacatccacaaaagtagaagcaagattacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tggcatgaaaggaagcagcaaaatcacattacatccacaaaagtagaagcaagattacag 261
Query: 61 accttcaaatttttcccatgggatctaccttcaggaaggttccacaccactagaagttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 accttcaaatttttcccatgggatctaccttcaggaaggttccacaccactagaagttcc 321
Query: 121 atatccttctcaaacagctctaccaagagggaactatgtgttcaaatgtaataagcctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atatccttctcaaacagctctaccaagagggaactatgtgttcaaatgtaataagcctat 381
Query: 181 ggcagacatttctcgtttaaaccaccacataaacttattacctgaggaatatctagctct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggcagacatttctcgtt-aaaccaccacataaacttattacctgaggaatatctagctct 440
Query: 241 gatttgcattttaaaagtatcattcttttgacaataaatgtaatataaactaattcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttgcattttaaaagtatcattcttttgacaataaatgtaatataaactaattcaaag 500
Query: 301 gagaagaactagagatactgagtttattgtattgcccacatgaaaatgtatttttttgtt 360
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 501 gagaagaactagagatactgagtttattgtattgtccagatgaaaatgtatttttttgtt 560
Query: 361 ctgaataacaaaatttcacaagtgtacatgctaacagagcaaatatacggagagcaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgaataacaaaatttcacaagtgtacatgctaacagagcaaatatacggagagcaagca 620
Query: 421 gagaaggatcaaagatgacttaaggttttggaattagaatttagatgcctctattagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaaggatcaaagatgacttaaggttttggaattagaatttagatgcctctattagcag 680
Query: 481 aagaatgttagcagtgaagactgaatgaaacgaagacagtgactagcactcaatcacttt 540
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 681 aagaatgttagcagtgaagacttaatgaaacgaagacagtgactaccactcaatcacttt 740
Query: 541 ctgaacattattggtatac 559
|||||||||||||||||||
Sbjct: 741 ctgaacattattggtatac 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|