Query= MSMg01no183_j06.b1 MSMg01no183_j06.b1 CHROMAT_FILE:
MSMg01no183_j06.b1 PHD_FILE: MSMg01no183_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:38 2005
(426 letters)
>mm_chr14_48017496_48018320
Length = 825
Score = 775 bits (401), Expect = 0.0
Identities = 416/421 (98%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 5 gaattcatatattgctctattacattctgattgccgtgggggcaagggagcaaggatata 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaattcatatattgct-tattacattctgattgccgtgggggcaagggagcaaggatata 369
Query: 65 ctcaacacaaaatgtaagacgtgtccttccaaagagaagaaagtcacagatgagtagtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctcaacacaaaatgtaagacgtgtccttccaaagagaagaaagtcacagatgagtagtag 309
Query: 125 acttggggtacctcggtgacttatgctcctagacagtgggtggatgtgcatgtgtttggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acttggggtacctcggtgacttatgctcctagacagtgggtggatgtgcatgtgtttggt 249
Query: 185 ttattctgagagttggacccgtgttgacatatgtttgtggcagccttgtaataccagctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttattctgagagttggacccgtgttgacatatgtttgtggcagccttgtaataccagctc 189
Query: 245 tagggaggctgggcagggttcaagaccagcgtgtgctacatagcaagtatcaggacagca 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 188 tagggaggctgggcagggttcaagaccagcgtgggctacatagcaagtatcaggacagca 129
Query: 305 aggactatatagcaagactctgttatacacaaccagaacacacctcctatgtttatgtat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aggactatatagcaagactctgttatacacaaccagaacacacctcctatgtttatgtat 69
Query: 365 ttgcttgcgaccgcaatagcagtagataatttgtgttttgtttatgctaaactctagata 424
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ttgcttgtgattgcaatagcagtagataatttgtgttttgtttatgctaaactctagata 9
Query: 425 g 425
|
Sbjct: 8 g 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 825
Length adjustment: 9
Effective length of query: 417
Effective length of database: 816
Effective search space: 340272
Effective search space used: 340272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_j06.g1 MSMg01no183_j06.g1 CHROMAT_FILE:
MSMg01no183_j06.g1 PHD_FILE: MSMg01no183_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:38 2005
(652 letters)
>mm_chr14_47868696_47869747
Length = 1052
Score = 1237 bits (640), Expect = 0.0
Identities = 649/652 (99%)
Strand = Plus / Plus
Query: 1 aatcaggagccctttctgtcacctaatttacatgcccaaccaaaacaacccaaatcaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcaggagccctttctgtcacctaatttacatgcccaaccaaaacaacccaaatcaccc 260
Query: 61 taacaggggtttctccttttccctttataaactgccatttgcgcaagggtcacatctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaggggtttctccttttccctttataaactgccatttgcgcaagggtcacatctgtc 320
Query: 121 tcatttctatccagaggcagtccttccacggcaacatacaccttctccctcacccttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttctatccagaggcagtccttccacggcaacatacaccttctccctcacccttgtt 380
Query: 181 ccttctcctttcccccttcatgttctgtctcctgtctttgtcacctattccttgctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttctcctttcccccttcatgttctgtctcctgtctttgtcacctattccttgctcttt 440
Query: 241 gtccctcatgaagcaaatctcctttgggctgagaacgtggtcttagggcgccctgcgcca 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 441 gtccctcatgaagcaaatctcctttgggctgagaacgtggtcttagggcgtcctgtgcca 500
Query: 301 gttccagttctttcaaaggacatgtgctgcgcttggagagagcctaggttctattcccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttccagttctttcaaaggacatgtgctgcgcttggagagagcctaggttctattcccaa 560
Query: 361 tgcccacacagcagctcctcactgcccagaactccacttccaggatacctcataccctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcccacacagcagctcctcactgcccagaactccacttccaggatacctcataccctct 620
Query: 421 cctggcctccgtgatcatcaggcacacacatggtgcatggacacacatggtgaatggaca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 cctggcctccgtgatcatcaggcacacacatggtgcatggacacacatggtgcatggaca 680
Query: 481 cacatgcagacagatactcataaaaagaccaggaggaggtgggaggaaccttcaattagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatgcagacagatactcataaaaagaccaggaggaggtgggaggaaccttcaattagt 740
Query: 541 gcatcttagaaaacactcacttttctctttggattgaattgacaatccagcacacgacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcatcttagaaaacactcacttttctctttggattgaattgacaatccagcacacgacaa 800
Query: 601 tttgagcttaaaataagttcttgctctctgagggacattaggggtcttatga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttgagcttaaaataagttcttgctctctgagggacattaggggtcttatga 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
