Query= MSMg01no183_n17.b1 MSMg01no183_n17.b1 CHROMAT_FILE:
MSMg01no183_n17.b1 PHD_FILE: MSMg01no183_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:59 2005
(245 letters)
>mm_chr14_87881770_87882414
Length = 645
Score = 429 bits (222), Expect = e-125
Identities = 234/240 (97%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 5 gaattctttaatttgtgcatgaaattgttgaagttctaagttaactaactcaggacttat 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttaatttgtgtatgaaattgttgaagttctaagttaactaactcaggacttat 264
Query: 65 ccagtgttacccagtcgcaattttaaggagtaaattgacatgtacattatggaccatcta 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagtgttacccagtagcaattttaaggagtaaattgacatgtacattatggaccatcta 324
Query: 125 cattgtaaataacaaaatgtacagataaatttcacacagaaattttatacatatacatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattgtaaataacaaaatgtacagataaatttcacacagaaattttatacatatacatat 384
Query: 185 acatatactgtgtgtatatatgtatgtatatgtatatatatatatatatgtatatatata 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 acatatactgtgtgtatatatgtatgtatatgtatatatatatat----gtatatatata 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no183_n17.g1 MSMg01no183_n17.g1 CHROMAT_FILE:
MSMg01no183_n17.g1 PHD_FILE: MSMg01no183_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:59 2005
(673 letters)
>mm_chr14_88030650_88031723
Length = 1074
Score = 1288 bits (666), Expect = 0.0
Identities = 672/674 (99%), Gaps = 1/674 (0%)
Strand = Plus / Minus
Query: 1 taggtggaaagcaattaacctttgaatac-aacatggagagtggagctagaattgacctc 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 678 taggtggaaagcaattaacctttgaatacaaacatggagagtggagctagaattgacctc 619
Query: 60 aggaagagccgattctattgccttgtcaaatgagaggcatcctgaatcctccatggcaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aggaagagccgattctattgccttgtcaaatgagaggcatcctgaatcctccatggcaac 559
Query: 120 tctgtgtacagggagaaaaaaggctctctcaggacatgccaggagtcactggactgctat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tctgtgtacagggagaaaaaaggctctctcaggacatgccaggagtcactggactgctat 499
Query: 180 gttctcctcagatcagtacagcctccaggcctgcatcctgtctgtgctccacagcagctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gttctcctcagatcagtacagcctccaggcctgcatcctgtctgtgctccacagcagctg 439
Query: 240 gagacactcaggccactacaagttaagcaggatttgaagggagagagatctgtatatcct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gagacactcaggccactacaagttaagcaggatttgaagggagagagatctgtatatcct 379
Query: 300 aagcaggtcggtaagtgtgactaggctacagctctccaagaagcacagaccttctgggtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagcaggtcggtaagtgtgactaggctacagctctccaagaagcacagaccttctgggtt 319
Query: 360 ggaaatccaagttacaatattgaagaagttactcaagtaagacatggataaccaaatttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ggaaatccaagttacaatattgaagaagttactcaagtaagacatggataaccaaatttg 259
Query: 420 ttccttggctcagtcaatgtctatctgtccacgattatttttagcttaatataaccagat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttccttggctcagtcaatgtctatctgtccacgattatttttagcttaatataaccagat 199
Query: 480 attataaatattataaaatatagatataattagcaggggtattataatcttgttcttggt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 attataaatattataaaatatagatataattagcaggggtattataatcttgttcttggt 139
Query: 540 ccctggaagcttacagtctaaaaggttgcaggtgtataccagaaacaaacttctaatcta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ccctggaagcttacagtctaaaaggttgcaggtgtataccagaaacaaacttctaatcta 79
Query: 600 tttccttctgaatcagagagagcaaccaagaaaatactagatgctatcattgagaatgaa 659
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78 tttccttctgaatcagagagagcaaccaagaaaatacaagatgctatcattgagaatgaa 19
Query: 660 gcctttgttagttt 673
||||||||||||||
Sbjct: 18 gcctttgttagttt 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
