Query= MSMg01no184_c02.b1 MSMg01no184_c02.b1 CHROMAT_FILE:
MSMg01no184_c02.b1 PHD_FILE: MSMg01no184_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:22 2005
(325 letters)
>mm_chr14_16674984_16675708
Length = 725
Score = 530 bits (274), Expect = e-155
Identities = 315/334 (94%), Gaps = 12/334 (3%)
Strand = Plus / Minus
Query: 4 ggaattccaaagagggtagacatcaaccccctacatatgtgcatgctcacaaacaggcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggaattccaaagagggtagacatcaaccccctacatatgtgcatgctcacaaacaggcaa 630
Query: 64 atacacatacacactcacacacacacactcacactcacacacactcacacacactcaca- 122
|||||||||||||| ||||||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 629 atacacatacacacacacacacacacacacacacacacacacacactcacacactcacac 570
Query: 123 -ca--cacactcacacacacacacacacacaca--cacacacacactcactcacacacac 177
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 569 tcactcacactcacacacacacacacacacacactcacacacacactcactcacacacac 510
Query: 178 acagag------gagagagagagagagagagtgacctccaaaagtgatactattacatat 231
|||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 509 acagaggagagagagagagagagagagagagtgacttccaaaagtgatactattatatat 450
Query: 232 tgtaatacttgatttaaaaaatctgaggtcactaatgtactaatatcaaaatgtgtgccc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgtaatacttgatttaaaaaatctgaggtcactaatgtactaatatcaaaatgtgtgccc 390
Query: 292 ttctcctttaaaattacatttttattatttaaaa 325
||||||||||||||||||||||||||||||||||
Sbjct: 389 ttctcctttaaaattacatttttattatttaaaa 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 114
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_c02.g1 MSMg01no184_c02.g1 CHROMAT_FILE:
MSMg01no184_c02.g1 PHD_FILE: MSMg01no184_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:22 2005
(285 letters)
>mm_chr14_16553140_16553824
Length = 685
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 1 actgcaaagcagccatttcaaaacagtaagaactaagtagactgagtgtgtcctcctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgcaaagcagccatttcaaaacagtaagaactaagtagactgagtgtgtcctcctctg 260
Query: 61 cagcctctctcttagattttccaggggggaaaaatgactcattccagttactctgcaatg 120
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 261 cagcctctctcttagattttccaggggggggaaattactcattccagttactctgcaatg 320
Query: 121 tgaaataaataggaatctgtacctgggcaagtggaatgcagggatcattgctctttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaataaataggaatctgtacctgggcaagtggaatgcagggatcattgctctttcttt 380
Query: 181 gtaatttagctttcttgcatttgttatacaaggaaacactgggctttttatgaatgtcac 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gtaatttagctttcttgcatttgttatacagggaaacactgggctttttatgaatgtcac 440
Query: 241 tgcagaaagcttgcagagtttcaaaggataaggctgaaattctta 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcagaaagcttgcagagtttcaaaggataaggctgaaattctta 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
