Query= MSMg01no184_g23.b1 MSMg01no184_g23.b1 CHROMAT_FILE:
MSMg01no184_g23.b1 PHD_FILE: MSMg01no184_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:48 2005
(411 letters)
>mm_chr14_89355406_89356216
Length = 811
Score = 783 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 5 gaattctaggagagaaattaaatccaagataattattcctacaaggtacattcgcctctc 64
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Sbjct: 205 gaattctaggagagaaattaaatccaagataattattcctacaaggtacattcgcctctc 264
Query: 65 tggaaggctacttatctgatgtatattacctctactagtatctaagattaagtaacttgg 124
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Sbjct: 265 tggaaggctacttatctgatgtatattacctctactagtatctaagattaagtaacttgg 324
Query: 125 aatcatattaagcatttaaattatactagtcaagaccagctttcattattactatactct 184
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Sbjct: 325 aatcatattaagcatttaaattatactagtcaagaccagctttcattattactatactct 384
Query: 185 atcatcagtattcacaaaaatcccagggttactgttaatagaggatagtaacaataaaag 244
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Sbjct: 385 atcatcagtattcacaaaaatcccagggttactgttaatagaggatagtaacaataaaag 444
Query: 245 taaaagttgagagcatgaaggatttctaagtaacataagttaaacaaacaaaaagcacaa 304
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Sbjct: 445 taaaagttgagagcatgaaggatttctaagtaacataagttaaacaaacaaaaagcacaa 504
Query: 305 gtatgattaccaagactataaaaacaatatttcctgagtttcctccctccaaaaataggc 364
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Sbjct: 505 gtatgattaccaagactataaaaacaatatttcctgagtttcctccctccaaaaataggc 564
Query: 365 aggcaataatattttctttgttgaggattacccaatttgtcaagc 409
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Sbjct: 565 aggcaataatattttctttgttgaggattacccaatttgtcaagc 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_g23.g1 MSMg01no184_g23.g1 CHROMAT_FILE:
MSMg01no184_g23.g1 PHD_FILE: MSMg01no184_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:48 2005
(282 letters)
>mm_chr14_89506204_89506885
Length = 682
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%), Gaps = 2/283 (0%)
Strand = Plus / Minus
Query: 1 cacaattttttaatggacatgctttacgataattaagcttttgaa-cacctggagacaat 59
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 385 cacaattttttaatggacatgctttacgataattaagcttttgaacca-ctggagacaat 327
Query: 60 aaagagagtcaggtttgcattattaaagagttggtgatttgcattttgttgttgctgatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaagagagtcaggtttgcattattaaagagttggtgatttgcattttgttgttgctgatt 267
Query: 120 gtattggtgtgtggtatttatatttattttcaactcatataatgaattcattggtagagt 179
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Sbjct: 266 gtattggtgtgtggtatttatatttattttcaactcatataatgaattcattggtagagt 207
Query: 180 atactctttaatttttttcttttgaaaaattaaataaatttaagaaatacaatcaactta 239
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Sbjct: 206 atactctttaatttttttcttttgaaaaattaaataaatttaagaaatacaatcaactta 147
Query: 240 tttgtatcaagacccgaattacacatcgacaacatacaaatct 282
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Sbjct: 146 tttgtatcaagacccgaattacacatcgacaacatacaaatct 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
