MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-186L04
Chromosome	14 (Build37)
Map Location	46,254,416 - 46,254,901
singlet/doublet	singlet
Overlap gene	Ddhd1
Upstream gene	EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884
Downstream gene	EG637379, LOC666834, LOC100041685, LOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732, LOC100041754
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG666725 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666725 MGI:3644430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG624966 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624966 MGI:3647825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	EG666744 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666744 MGI:3648993
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Ptgdr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19214 MGI:102966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptger2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19217 MGI:97794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041591 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	5730420B22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70561 MGI:1917811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041611 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	6330416L11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70713 MGI:1917963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ero1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50527 MGI:1354385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psmc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67089 MGI:1914339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Styx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56291 MGI:1891150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnpnat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54342 MGI:1858963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218952 MGI:2385001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG382884 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382884 MGI:3645516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 4 Proteins

name	Ddhd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114874 MGI:2150302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG637379 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637379 MGI:3646634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 433 ESTs, 10 Proteins

name	LOC666834 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 ESTs, 4 Proteins pseudo : _no_value

name	LOC100041685 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC625377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins pseudo : _no_value

name	LOC218963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs pseudo : _no_value

name	LOC100041724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Bmp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12159 MGI:88180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041732 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041754 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG624966 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265478 GeneID:624966 MGI:3647825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG624966 transcript_id : XM_889508.3

name	Ptgdr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357272 GeneID:19214 MGI:102966
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin D receptor transcript_id : NM_008962.3

name	Ptger2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227232 GeneID:19217 MGI:97794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin E receptor 2 (subtype EP2) transcript_id : NM_008964.3

name	5730420B22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372751 GeneID:70561 MGI:1917811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730420B22 gene transcript_id : NM_172597.2

name	LOC100041611 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265482 GeneID:100041611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to hCG1790059 transcript_id : XM_001476686.1

name	6330416L11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397036 GeneID:70713 MGI:1917963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 6330416L11 gene transcript_id : XM_986046.1

name	Ero1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15718668 GeneID:50527 MGI:1354385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ERO1-like (S. cerevisiae) transcript_id : NM_015774.2

name	Psmc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373033 GeneID:67089 MGI:1914339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) 26S subunit, ATPase, 6 transcript_id : NM_025959.3

name	Styx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130655 GeneID:56291 MGI:1891150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoserine/threonine/tyrosine interaction protein transcript_id : NM_019637.3

name	Gnpnat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130756 GeneID:54342 MGI:1858963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosamine-phosphate N-acetyltransferase 1 transcript_id : NM_019425.2

name	Plekhc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67906178 GeneID:218952 MGI:2385001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family C (with FERM domain) member 1 transcript_id : NM_146054.2

name	EG382884 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397038 GeneID:382884 MGI:3645516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 ESTs, 4 Proteins product : predicted gene, EG382884 transcript_id : XM_356730.5

name	Ddhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111955151 GeneID:114874 MGI:2150302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DDHD domain containing 1 transcript_id : NM_001039106.2

name	Ddhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111955223 GeneID:114874 MGI:2150302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DDHD domain containing 1 transcript_id : NM_176845.4

name	Ddhd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111955211 GeneID:114874 MGI:2150302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DDHD domain containing 1 transcript_id : NM_001042719.1

name	EG637379 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265484 GeneID:637379 MGI:3646634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 433 ESTs, 10 Proteins product : predicted gene, EG637379, transcript variant 2 transcript_id : XM_925735.3

name	LOC100041724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265489 GeneID:100041724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100041724 transcript_id : XM_001476890.1

name	Bmp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949822 GeneID:12159 MGI:88180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 4 transcript_id : NM_007554.2

name	LOC100041732 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265493 GeneID:100041732
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041732 transcript_id : XM_001476910.1

name	LOC100041754 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265495 GeneID:100041754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041754 transcript_id : XM_001476947.1

name	EG624966 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265479 GeneID:624966 MGI:3647825
definition	codon_start : 1 product : similar to CDNA sequence BC061237 protein_id : XP_894601.3

name	Ptgdr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543521 CCDS:CCDS26971.1 GeneID:19214 MGI:102966
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004956 - prostaglandin D receptor activity [Evidence IDA]; GO:0001785 - prostaglandin J receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004960 - thromboxane receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : prostaglandin D receptor protein_id : NP_032988.2

name	Ptger2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679529 CCDS:CCDS26972.1 GeneID:19217 MGI:97794
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004960 - thromboxane receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : EP2 receptor; prostaglandin E receptor EP2 subtype; prostaglandin E receptor 2 (EP2 subtype); prostaglandin E receptor subtype EP2 product : prostaglandin E receptor 2 (subtype EP2) protein_id : NP_032990.1

name	5730420B22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27501462 CCDS:CCDS26973.1 GeneID:70561 MGI:1917811
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70561 protein_id : NP_766185.1

name	LOC100041611 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265483 GeneID:100041611
definition	codon_start : 1 product : similar to hCG1790059 protein_id : XP_001476736.1

name	6330416L11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397037 GeneID:70713 MGI:1917963
definition	codon_start : 1 product : G protein-coupled receptor 137C protein_id : XP_991140.1

name	Ero1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657067 GeneID:50527 MGI:1354385
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IDA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006457 - protein folding [Evidence ISS] [Evidence IDA]; GO:0006810 - transport [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA] codon_start : 1 product : ERO1-like protein_id : NP_056589.1

name	Psmc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754103 CCDS:CCDS26974.1 GeneID:67089 MGI:1914339
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence IEA] codon_start : 1 product : proteasome 26S ATPase subunit 6 protein_id : NP_080235.2

name	Styx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46852143 CCDS:CCDS26975.1 GeneID:56291 MGI:1891150
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : protein tyrosine phosphatase-like unspliced c-terminal product and spliced c-terminal end STYX; STNS (alternatively spliced intron of Styx) product : phosphoserine/threonine/tyrosine interaction protein protein_id : NP_062611.2

name	Gnpnat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506761 CCDS:CCDS26976.1 GeneID:54342 MGI:1858963
definition	GO_component : GO:0005793 - ER-Golgi intermediate compartment [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005770 - late endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004343 - glucosamine 6-phosphate N-acetyltransferase activity [Evidence IDA]; GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006048 - UDP-N-acetylglucosamine biosynthesis [Evidence TAS] codon_start : 1 note : glucosamine-6-phosphate acetyltransferase product : glucosamine-phosphate N-acetyltransferase 1 protein_id : NP_062298.1

name	Plekhc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67906179 CCDS:CCDS26977.1 GeneID:218952 MGI:2385001
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 note : mitogen inducible 2 product : pleckstrin homology domain containing, family C (with FERM domain) member 1 protein_id : NP_666166.2

name	EG382884 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38076099 GeneID:382884 MGI:3645516
definition	codon_start : 1 product : hypothetical protein protein_id : XP_356730.1

name	Ddhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955152 CCDS:CCDS26978.1 GeneID:114874 MGI:2150302
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; phosphatidic acid-preferring phospholipase A1 product : DDHD domain containing 1 isoform 1 protein_id : NP_001034195.2

name	Ddhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955224 GeneID:114874 MGI:2150302
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; phosphatidic acid-preferring phospholipase A1 product : DDHD domain containing 1 isoform 2 protein_id : NP_789815.3

name	Ddhd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955212 GeneID:114874 MGI:2150302
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; phosphatidic acid-preferring phospholipase A1 product : DDHD domain containing 1 isoform 3 protein_id : NP_001036184.1

name	EG637379 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265485 GeneID:637379 MGI:3646634
definition	codon_start : 1 product : similar to 60S ribosomal protein L9 isoform 2 protein_id : XP_930828.3

name	LOC100041724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265490 GeneID:100041724
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476940.1

name	Bmp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949823 GeneID:12159 MGI:88180
definition	GO_function : GO:0005125 - cytokine activity [Evidence ISS] [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0021904 - dorsoventral neural tube patterning [Evidence IDA]; GO:0030218 - erythrocyte differentiation [Evidence IDA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0030900 - forebrain development [Evidence IGI]; GO:0007281 - germ cell development [Evidence IMP]; GO:0040007 - growth [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0007500 - mesodermal cell fate determination [Evidence IMP]; GO:0001656 - metanephros development [Evidence IDA] [Evidence IMP]; GO:0045662 - negative regulation of myoblast differentiation [Evidence ISS]; GO:0045843 - negative regulation of striated muscle development [Evidence ISS]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IGI] [Evidence IDA]; GO:0001503 - ossification [Evidence IEA]; GO:0001649 - osteoblast differentiation [Evidence IDA]; GO:0030501 - positive regulation of bone mineralization [Evidence ISS]; GO:0045597 - positive regulation of cell differentiation [Evidence IDA]; GO:0045778 - positive regulation of ossification [Evidence ISS]; GO:0045669 - positive regulation of osteoblast differentiation [Evidence ISS]; GO:0001934 - positive regulation of protein amino acid phosphorylation [Evidence ISS]; GO:0045595 - regulation of cell differentiation [Evidence IGI]; GO:0001501 - skeletal development [Evidence IMP] [Evidence IDA]; GO:0051145 - smooth muscle cell differentiation [Evidence IDA]; GO:0021978 - telencephalon regionalization [Evidence IDA]; GO:0009888 - tissue development [Evidence IGI]; GO:0001657 - ureteric bud development [Evidence ISS] [Evidence IMP] [Evidence IDA] codon_start : 1 product : bone morphogenetic protein 4 protein_id : NP_031580.2

name	LOC100041732 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265494 GeneID:100041732
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476960.1

name	LOC100041754 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265496 GeneID:100041754
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476997.1

name	EG666725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666725
definition	number : 4 pseudo : _no_value

name	EG666725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666725
definition	number : 3 pseudo : _no_value

name	EG666725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666725
definition	number : 2 pseudo : _no_value

name	EG666725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666725
definition	number : 1 pseudo : _no_value

name	EG666744 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666744
definition	number : 5 pseudo : _no_value

name	EG666744 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666744
definition	number : 4 pseudo : _no_value

name	EG666744 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666744
definition	number : 3 pseudo : _no_value

name	EG666744 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666744
definition	number : 2 pseudo : _no_value

name	EG666744 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666744
definition	number : 1 pseudo : _no_value

name	LOC100041591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041591
definition	number : 1 pseudo : _no_value

name	LOC100041591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041591
definition	number : 2 pseudo : _no_value

name	LOC100041591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041591
definition	number : 3 pseudo : _no_value

name	LOC100041591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041591
definition	number : 4 pseudo : _no_value

name	LOC100041591 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041591
definition	number : 5 pseudo : _no_value

name	LOC100041685 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041685
definition	number : 3 pseudo : _no_value

name	LOC100041685 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041685
definition	number : 2 pseudo : _no_value

name	LOC100041685 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041685
definition	number : 1 pseudo : _no_value

name	LOC666834 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265603 GeneID:666834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 90 ESTs, 4 Proteins product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) pseudo : _no_value transcript_id : XR_033656.1

name	LOC625377 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265487 GeneID:625377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins product : similar to SMT3 isopeptidase 1 pseudo : _no_value transcript_id : XR_032952.1

name	LOC218963 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:84872148 GeneID:218963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin pseudogene pseudo : _no_value transcript_id : NR_002856.1

clone name	MSMg01-130N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-317E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387G05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-322M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176D07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-318G17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-263E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-386N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-049G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277G09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-186L04.T7 (MSMg01no186_l04.b1)	MSMg01-186L04.TJ (MSMg01no186_l04.g1)
ACC	AG378299	AG378300
length	716	883
length of high quality (start - end)	489 (46 - 534)	---
definition	CHROMAT_FILE: MSMg01no186_l04.b1 PHD_FILE: MSMg01no186_l04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:01:46 2005	CHROMAT_FILE: MSMg01no186_l04.g1 PHD_FILE: MSMg01no186_l04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:01:46 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCCTAGTGTCAAATCTGCCAACAGTCCCTCCACCCCTGCTAACACTT AGTTGTCAGCCCACGTCTGTGTAAGCATACATGTGCATCTCTTCAGAAAC CTAATCCACCTTTTACAGTTGCCAAAAACTATTTATTTCAATACTGAAAT TCTCTTATGGCTCTGCACTGCTCCTCAGATAAGTTCCTAATCATCTTCCC TTAGACTGCCTCTTCATTTATTTCACATATATTCACACAACTTTTGAGTA TGTACCATAAAGCAGGCACCAAGGTAGACTGTGGGATGCAGAAGAGATCG CTGATGGTCCTGGTACTTTTCACACCAACAGGGCACTTCCATGTGTGTGT GTATGTATACGTGCAAGGCGCGTATCTGGCTATTCTGTGTATGCAGCTCC TGGAATGCTCTTACATATGTTCATAGGTTGTTCTTACCTACTTTCATCTC GTTAACTACTAGCTTTACCTTTTCACAAGTCCTTCCCTTAGCTATGACTC TACTGGAGTAATGCTATACAGATCTGTCCGTGTTTACCTTGAACATATTC TTTTTAAATTATACCTTAGAGATTTTAAAAAAATTATATCCAAATCCAAT CCTTAACCAGGTAAAGGGTTAAGGACATTTTCCCATGTACTTTGCAACCC TGGATCTCAAACACTN	TTCGGTTTTGATGATTATGAAGGGAGAAATTTTTTAACNNNCCAATGATG ATAGGGGAGCCAGGAGGCGACTGTTCAAAAATGTAGGTGAATTATAGAAT TTCCGAGGAATATTGGGTGTATAAATTGGGAGGTTTGAGTTAGATAGATG AGTTTTTTCCCTTAAAAAAGTGATTATAAAAAGAGGTAAAGGGGGAGTTA GTGGGGAAGTTAGAGAGGAAAGTATTATGTTTTGAGAAAGTGAGAAGAGG GGTTGTATAGTGAAATAGAAGATAGGGATATAAAAGGGGAGAAGATTTAG AGGGGAAGGTGGTGTTTAGCGTTTGTGATTGATTAAAATGAGGAAAAGTA AAAAGAATTTAATGGAAGTAAAGATTGTTTTTTTTTTTTTGTGTGGAGAG AAGAAAAGGGGTGTAAGAAGGTTTTTTTTATTGTTTCCTCGCCGGCGGGA GAGGAAGGAGAAAGAGAGGGAAGTGGAGGGAGGGTGGTGCCCCCCTGTGG AGAAAAAAAAAAATTCTATTTTAAGGGGGGGTAAGGGGGTTTGATTGAAA AAAAATGGGTAGAATAAATGTTTAGGGAATGTGATTTTGAGGGATGAAAG TTAGGGTGAAATAGAATACTAGGGAGAGGGGGGGAGATAATGGAAGTTGT GGGGATGGGTGTTTATGCGTGGATTGAAAAAGAGAGTGATATGAAATATA ATAGTAGAAGTAATGTTAAAATAATATGGTGGAGGAAGGAAGTGTGGAGA ATAAATTATTGGAAAATTGGATGGTATGAAATGGTAGTAATAATATAGGG GGGGGAGATTGTTGTATAGAGGATTTAAAGTAAAGAAGTGATTATGAAGT GTTTTGTAAAGAGATGTGGAGTGTTAAAGGGAG
quality values	Open. Hide. 8 10 8 12 15 11 15 18 37 34 29 29 28 22 22 30 30 30 30 33 30 30 32 37 43 35 30 30 35 35 36 48 53 53 57 57 57 57 57 57 26 24 10 14 14 33 34 57 57 42 42 41 41 50 50 54 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 62 62 62 62 68 62 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 57 68 68 68 57 57 59 59 59 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 59 57 57 46 43 46 46 57 57 57 57 57 54 57 59 48 47 47 43 39 39 39 42 46 57 57 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 53 50 59 59 59 41 37 32 21 13 8 8 8 8 10 19 34 47 59 47 48 43 43 47 47 48 47 59 59 57 57 57 48 48 48 48 47 59 59 47 59 59 43 36 32 41 39 47 47 47 47 47 59 48 48 48 48 48 57 57 48 48 48 57 43 43 37 39 39 47 47 47 47 39 39 39 39 32 29 29 37 39 39 41 36 41 41 41 41 41 34 47 43 43 43 47 47 48 48 48 43 43 39 40 40 34 25 27 22 13 13 17 24 24 22 35 36 35 29 31 35 15 9 7 7 7 9 13 22 13 13 10 10 11 15 15 25 30 30 30 30 24 22 22 18 18 13 13 9 9 8 8 8 10 10 10 13 14 15 13 10 10 10 10 22 19 21 9 9 8 8 8 8 8 8 8 10 10 10 9 14 12 13 11 10 10 10 9 9 12 10 12 12 16 21 28 21 18 18 19 21 19 8 8 6 6 6 6 10 9 9 9 8 9 9 9 10 10 22 20 20 18 18 14 13 13 10 10 10 10 13 15 19 16 15 12 12 11 11 11 11 12 14 10 10 10 8 8 8 8 8 8 12 20 11 15 12 15 11 11 11 11 11 11 11 11 11 11 8 8 10 8 10 8 8 8 8 8 8 8 8 10 10 8 8 6 6 6 6 6 8 8 6 6 8 8 8 8 8 8 8 8 11 11 9 9 3 0	Open. Hide. 16 19 9 9 13 13 18 13 15 10 12 9 9 12 10 8 9 10 8 13 7 7 8 6 8 8 8 10 8 8 8 8 8 8 8 8 8 3 0 0 0 3 9 8 8 8 8 9 8 10 6 6 6 7 10 9 8 11 8 8 8 9 10 9 10 10 8 8 8 8 8 8 8 8 8 8 9 9 9 12 13 9 9 10 12 10 16 23 27 25 25 21 21 30 30 15 15 11 12 12 11 11 10 10 11 11 11 9 10 9 10 9 12 10 10 8 8 8 6 6 8 6 11 21 15 12 11 12 8 8 7 7 8 8 10 11 11 17 13 10 10 11 11 8 6 8 6 6 8 8 8 9 10 17 17 20 12 12 11 11 11 9 9 9 18 17 28 16 16 11 11 11 11 10 10 10 13 13 10 11 10 9 10 10 10 10 12 9 8 8 8 8 6 8 12 11 10 10 13 11 13 11 13 11 13 10 10 10 10 10 10 10 10 15 10 8 8 6 6 6 8 8 10 10 12 8 8 8 8 8 9 8 8 8 8 8 8 10 11 13 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 10 10 10 11 10 10 10 10 15 12 9 9 8 8 8 8 8 8 8 8 8 10 10 10 9 8 8 8 8 8 8 8 8 8 12 11 13 12 12 12 12 12 11 13 11 11 10 9 8 8 6 6 8 6 9 10 10 10 15 14 15 16 12 15 8 8 8 11 11 13 15 8 6 6 7 11 17 15 17 10 8 8 8 8 12 18 15 8 8 8 8 8 8 9 8 8 8 8 8 8 9 9 10 10 8 8 8 8 10 11 11 11 13 13 17 22 22 18 15 15 13 8 8 6 7 11 6 10 10 11 8 8 6 6 8 8 10 12 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 9 13 14 12 8 8 9 9 9 8 8 8 9 9 8 8 8 8 8 8 9 9 9 9 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 10 12 12 12 11 11 9 10 12 10 10 10 10 8 8 8 8 6 6 8 8 8 8 8 6 6 6 6 7 7 9 6 6 6 6 6 8 6 6 6 13 15 22 24 13 13 11 9 13 8 9 7 9 9 9 8 8 9 9 9 9 12 16 18 12 9 8 8 8 8 9 10 12 12 8 8 8 8 8 8 8 8 8 7 7 8 11 16 16 10 10 10 13 8 8 8 7 8 8 8 7 7 8 12 8 8 8 8 8 8 8 8 12 6 6 8 8 6 6 8 8 9 9 9 9 9 9 11 10 14 13 11 11 11 11 11 10 10 10 9 9 10 10 10 9 7 10 8 8 8 8 8 15 8 6 6 8 8 8 8 10 10 10 10 15 10 12 10 12 12 21 21 19 12 12 12 11 10 10 10 8 8 8 9 8 8 6 6 8 8 10 9 9 10 9 12 9 10 8 8 8 8 8 8 11 11 8 8 6 6 8 8 8 8 8 8 8 7 6 8 8 9 9 9 8 8 6 6 8 15 12 8 8 9 10 13 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 11 12 16 10 6 6 7 6 8 8 12 8 8 8 8 7 7 8 8 8 8 10 10 8 8 6 7 10 8 8 8 10 10 8 8 8 8 8 10 9 9 10 11 10 10 10 10 9 9 10 10 13 10 10 10 10 9 8 8 6 6 6 6 8 8 10 6 6 6 6 6 8 11 8 8 8 8 8 12 10 13 13 15 15 17 13 7 7 6 6 8 15 13 8 8 6 6 10 10 10 8 8 8 10 10 10 8 9 10 8 8 6 6 8 8 8 6 6 8 8 10 13 15 15 14 10 10 10 10 10 13 17 16 10 8 9 9 8 8 8 8 9 8 8 8 6 7 13 8 8 8 8 10 10 10 10 10 10 10 10 12 10 10 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no186_l04.b1 MSMg01no186_l04.b1 CHROMAT_FILE:
MSMg01no186_l04.b1 PHD_FILE: MSMg01no186_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:46 2005
         (489 letters)



>mm_chr14_46254213_46255101
          Length = 889

 Score =  924 bits (478), Expect = 0.0
 Identities = 484/486 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctagtgtcaaatctgccaacagtccctccacccctgctaacacttagttgtca 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctagtgtcaaatctgccaacagtccctccacccctgctaacacttagttgtca 263

                                                                       
Query: 64  gcccacgtctgtgtaagcatacatgtgcatctcttcagaaacctaatccaccttttacag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcccacgtctgtgtaagcatacatgtgcatctcttcagaaacctaatccaccttttacag 323

                                                                       
Query: 124 ttgccaaaaactatttatttcaatactgaaattctcttatggctctgcactgctcctcag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgccaaaaactatttatttcaatactgaaattctcttatggctctgcactgctcctcag 383

                                                                       
Query: 184 ataagttcctaatcatcttcccttagactgcctcttcatttatttcacatatattcacac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataagttcctaatcatcttcccttagactgcctcttcatttatttcacatatattcacac 443

                                                                       
Query: 244 aacttttgagtatgtaccataaagcaggcaccaaggtagactgtgggatgcagaagagat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacttttgagtatgtaccataaagcaggcaccaaggtagactgtgggatgcagaagagat 503

                                                                       
Query: 304 cgctgatggtcctggtacttttcacaccaacagggcacttccatgtgtgtgtgtatgtat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgctgatggtcctggtacttttcacaccaacagggcacttccatgtgtgtgtgtatgtat 563

                                                                       
Query: 364 acgtgcaaggcgcgtatctggctattctgtgtatgcagctcctggaatgctcttacatat 423
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acgtgcaaggtgggtatctggctattctgtgtatgcagctcctggaatgctcttacatat 623

                                                                       
Query: 424 gttcataggttgttcttacctactttcatctcgttaactactagctttaccttttcacaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gttcataggttgttcttacctactttcatctcgttaactactagctttaccttttcacaa 683

                 
Query: 484 gtcctt 489
           ||||||
Sbjct: 684 gtcctt 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information