Query= MSMg01no187_h15.b1 MSMg01no187_h15.b1 CHROMAT_FILE:
MSMg01no187_h15.b1 PHD_FILE: MSMg01no187_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:48 2005
(318 letters)
>mm_chr14_17245931_17246648
Length = 718
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgatttacggttaagttattatggtttacggaaggaatggcttgtaggaatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgatttacggttaagttattatggtttacggaaggaatggcttgtaggaatg 264
Query: 65 ctgggagcagaatctacaaagcttaataatcaagcccgtttcattttagagaagatacag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgggagcagaatctacaaagcttaataatcaagcccgtttcattttagagaagatacag 324
Query: 125 gggaaaattactataggtaaggcataaccattaaagatttgaacattagttaaaatggag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggaaaattactataggtaaggcataaccattaaagatttgaacattagttaaaatggaa 384
Query: 185 aaaaatctttattaatagaagacatttttttatcagtagaatataagcaaatacaaattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaatctttattaatagaagacatttttttatcagtagaatataagcaaatacaaattg 444
Query: 245 atctcttttcttgatcctaattttatttttccctcacatagagaataggtcaaagaaaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atctcttttcttgatcctaattttatttttccctcacatagagaataggtcaaagaaaga 504
Query: 305 tttgattcaaatgt 318
||||||||||||||
Sbjct: 505 tttgattcaaatgt 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_h15.g1 MSMg01no187_h15.g1 CHROMAT_FILE:
MSMg01no187_h15.g1 PHD_FILE: MSMg01no187_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:48 2005
(286 letters)
>mm_chr14_17363662_17364349
Length = 688
Score = 522 bits (270), Expect = e-153
Identities = 283/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 tctgaatctacctcatggtctcctccacccacccatggccacattgctctgcggttgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 tctgaatctacctcatggtctcctccacccacccatggccacattgctctgcgattgggg 429
Query: 61 aggatgctctaggaccagcatttgggttcagtttgccacttgatgagacagcttattgat 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aggatgctctatgaccagcatttgggttcagtttgccacttgatgagacagcttattgat 369
Query: 121 ttaatttttctattagttgagcttactgattattgggataacttctcctggccaagttga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 368 ttaatttttctattagttgagcttactgattattgggataacttctcttggccaagttga 309
Query: 181 actgaccttcagtcattgggataacttcttctggccaagttgaactgacct--tcagtct 238
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 308 actgaccttcagtcattgggataacttcttctggccaagttgaactgaccttctcagtct 249
Query: 239 tctcccactcctcatttacaccagggaaataacaagtggagggtccct 286
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tctcccactcctcatttacaccagggaaataacaagtggagggtccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 688
Length adjustment: 9
Effective length of query: 277
Effective length of database: 679
Effective search space: 188083
Effective search space used: 188083
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
