Query= MSMg01no187_i05.b1 MSMg01no187_i05.b1 CHROMAT_FILE:
MSMg01no187_i05.b1 PHD_FILE: MSMg01no187_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:51 2005
(686 letters)
>mm_chr14_81537077_81538161
Length = 1085
Score = 1280 bits (662), Expect = 0.0
Identities = 677/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtgtgggaggaagagtataaattttttttctgctattattttaacttacttta 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattcagtgtgggaggaagagtataaattttttt-ctgctattattttaacttacttta 263
Query: 65 tcctttcagttagactgggtgatattctattagataagacattagggaaacactttatta 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 tcctttcagttagactgggtgatattttattagataagacattagggaaacactttatta 323
Query: 125 aatattcacatattaaaagagaatcatagtttatttatcagataaattttaaataaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatattcacatattaaaagagaatcatagtttatttatcagataaattttaaataaaatt 383
Query: 185 gttattttgcaaaggcagaagcctataatagaattccaagaaaatcattaaaattttaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttattttgcaaaggcagaagcctataatagaattccaagaaaatcattaaaattttaag 443
Query: 245 aaaaatattctggtagaaattttcaatagtcatttaatgcccgagactccaagaatcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaatattctggtagaaattttcaatagtcatttaatgcccgagactccaagaatcaat 503
Query: 305 aaagataacttctctaggtgcaaaacacaacttcatctttcaggtacacatagtatgtaa 364
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagataatttctctaggtgcaaaacacaacttcatctttcaggtacacatagtatgtaa 563
Query: 365 atgtttttctcatggtctatatacactatacttagataaacctcaaatagtttcatgtgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgtttttctcatggtctatatacactatacttagataaacctcaaatagtttcatgtgg 623
Query: 425 tttcaaaggatgtcatataaaatttccagaaatttgctgtgtagattggcaggtctgatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttcaaaggatgtcatataaaatttccagaaatttgctgtgtagattggcaggtctgatc 683
Query: 485 aagaggtataattattaaaagtgagtgctctttctgaaatgataggtcagtaagttgcat 544
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagaggtataattattaaaagttagtgctctttctgaaatgataggtcagtaagttgcat 743
Query: 545 gttgttcagggtatcctttttaattgtttcaatttattttaaattctagctacagttctc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttgttcagggtatcctttttaattgtttcaatttattttaaattctagctacagttctc 803
Query: 605 cataaaggacacctaatggtcctgcactctttcctaaatgacaatcattcttttgggata 664
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 804 cataaaggacacctaatggtcctgcactctttcctaaatgacaatcgttcttttgggata 863
Query: 665 acatatttactctccatttgcg 686
||||||||||||||||||||||
Sbjct: 864 acatatttactctccatttgcg 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1085
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1075
Effective search space: 726700
Effective search space used: 726700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_i05.g1 MSMg01no187_i05.g1 CHROMAT_FILE:
MSMg01no187_i05.g1 PHD_FILE: MSMg01no187_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:51 2005
(655 letters)
>mm_chr14_81610376_81611431
Length = 1056
Score = 1112 bits (575), Expect = 0.0
Identities = 637/658 (96%), Gaps = 5/658 (0%)
Strand = Plus / Minus
Query: 1 tctgtaaatcaaaattagatgatgatggtgatggacacttcactttactaaagaagatga 60
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 856 tctgtaaatcaaaattagatgatgatgatgatggacacttcactttagtaaagaagatga 797
Query: 61 ggtacagtcccttaggaagcaacaggagagctatatgtaggagaatgcatctggtgactg 120
|| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 796 gggacagtcccttaggaagcaacatgagagctatctgtaggagaatgcatccagtgactg 737
Query: 121 taagggaagggcagtgagaatgtacatgtacaagagaaagaataagactaagacaattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 taagggaagggcagtgagaatgtacatgtacaagagaaagaataagactaagacaattca 677
Query: 181 ggcaatgagggaaagaatattgttccatgaggcatggaatagcacacagggaagagcc-c 239
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |
Sbjct: 676 ggcaatgagggaaagaatattgttccatgaagcatggaatagcacgcagggaagagccac 617
Query: 240 tgtcacatgccactgaggcatggttccacatgtgtgacaaccaataagctttgcctttga 299
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 -gtcacatgccactgtggcatggttccacatgtgtgacaaccaataagctttgcctttga 558
Query: 300 gttatttgtcctactcctgcaaaaagaacatattttggaatgccatccttgctgtacctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gttatttgtcctactcctgcaaaaagaacatattttggaatgccatccttgctgtacctt 498
Query: 360 gtcttgtatgaggatttctgatatgaacacaaagtggttcttcatcatcacagtcttcta 419
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 497 gtcttgtatgaggatttctgatatgatcacaaagtggttcttcatcatcacagtcttcta 438
Query: 420 catttattttggcatgcagtagagtagcatagccatcagctacatgaacccagtctttaa 479
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 catttattttggcattcagtagagtagcatagccatcagctacatgaacccagtctttaa 378
Query: 480 atattcctagaacatgagatacactaaattgtaaaattaccttatagtatttttttcaaa 539
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atattcctagaacatgagagacactaaattgtaaaattaccttatagtatttttttcaaa 318
Query: 540 cttacat-ttaaaatgacaagatttgaatctaatccttttattgttttgttattgtttga 598
||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 317 cttac-tcttaaaatgacaagatttgaatctaatccttccattgttttgttattgtttga 259
Query: 599 ttctacagtaaaga-ttttaaacattgaagaanatgcataaaaattatattaaatcat 655
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 258 ttctacagtaaagatttttaaacattgaagaaaatgcataaaaattatattaaatcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
