Query= MSMg01no188_l18.b1 MSMg01no188_l18.b1 CHROMAT_FILE:
MSMg01no188_l18.b1 PHD_FILE: MSMg01no188_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:29 2005
(278 letters)
>mm_chr14_120447398_120448075
Length = 678
Score = 416 bits (215), Expect = e-121
Identities = 250/273 (91%), Gaps = 18/273 (6%)
Strand = Plus / Minus
Query: 5 gaattcccagcacctactttgggtgacttacaactggctgtaactacagccctcagaatc 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 626 gaattcccagcacctactttggatgacttacaactggctgtaactacagccctaagaatc 567
Query: 65 agacaccatctactgccctctgtggacatagcactcacctggtatacacacacacacaca 124
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 566 agacaccatctactggcctctgtggacatagcactcacctggtat--------------- 522
Query: 125 cacacacacacacacacacacacacacacacacacacacacacacactaaaaataataaa 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ---acacacacacacacacacacacacacacacacacacacacacactaaaaataataaa 465
Query: 185 aaagcatatttacaagagaaactagtagtatccacaaatatattgatgaagtattagaaa 244
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 464 aaagcatatttacaagagaaactagtagtagacacaaatatattgatgaagtattagaaa 405
Query: 245 agaacagctaaaacagtagcagagactctagag 277
|||||||||||||||||||||||||||||||||
Sbjct: 404 agaacagctaaaacagtagcagagactctagag 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no188_l18.g1 MSMg01no188_l18.g1 CHROMAT_FILE:
MSMg01no188_l18.g1 PHD_FILE: MSMg01no188_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:29 2005
(238 letters)
>mm_chr14_120417334_120417971
Length = 638
Score = 458 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 aatttcgcttggacctttgtgattatgctcaataagcagggccttggagggcagactgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttcgcttggacctttgtgattatgctcaataagcagggccttggagggcagactgtc 260
Query: 61 atcagtgtttgcttgtccccgcgggatacaggtcagctaacagagtgacaaaaagctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagtgtttgcttgtccccgcgggatacaggtcagctaacagagtgacaaaaagctgaa 320
Query: 121 tcaagcgaggtgttcagggataatggaaaatcatgcatgccccgaagctagggtcaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaagcgaggtgttcagggataatggaaaatcatgcatgccccgaagctagggtcaatta 380
Query: 181 tccagggtaataaaaatgttaaaaattggaggaagtgggattaagtgttggagttag 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagggtaataaaaatgttaaaaattggaggaagtgggattaagtgttggagttag 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
