Query= MSMg01no192_o16.b1 MSMg01no192_o16.b1 CHROMAT_FILE:
MSMg01no192_o16.b1 PHD_FILE: MSMg01no192_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:57 2005
(419 letters)
>mm_chr14_31557258_31558076
Length = 819
Score = 565 bits (292), Expect = e-165
Identities = 316/324 (97%), Gaps = 3/324 (0%)
Strand = Plus / Minus
Query: 16 gaatt-cctgccatctggactacaaaagctctatcccaagaagacgacaaaaaattgtgt 74
||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 322 gaattccct-ccatctggactacaaaagctctattccaagaagaagacaaaaaattgtgt 264
Query: 75 tttgttttgtttttaactaatactacatcttgtaatagttaatgatctagctggacatac 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttgttttgtttttaactaatactacatcttgtaatagttaatgatctagctggacatac 204
Query: 135 tggctcacatctttaatactaggcactccagaggcagagataggcaggtatctgagtttg 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tggctcacatctttaatactaggcactccagaggcagagataggcaggtatctgagtttg 144
Query: 195 aggacagtttggtctacaaagagttctagaacagccagggtgtggtggtttaaatatgct 254
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 143 aggacagtttggtctacaaagagttctaggacagccagggtgtggtggtttaaatatgct 84
Query: 255 tggcccgtagggagtggtacagttaggaggtgtggccttgttggaagaaatgtatcactg 314
||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tggcccgtaggaattg-tacagttaggaggtgtggccttgttggaagaaatgtatcactg 25
Query: 315 tggggatgggctttggaggtctcc 338
||||||||||||||||||||||||
Sbjct: 24 tggggatgggctttggaggtctcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_o16.g1 MSMg01no192_o16.g1 CHROMAT_FILE:
MSMg01no192_o16.g1 PHD_FILE: MSMg01no192_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:58 2005
(330 letters)
>mm_chr14_31445782_31446511
Length = 730
Score = 572 bits (296), Expect = e-168
Identities = 322/332 (96%), Gaps = 4/332 (1%)
Strand = Plus / Plus
Query: 1 atgcgtgtgtactgaggggccagcaggggtctgtgtatgggagggcttgtaggaagagag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcctgtgtactgaggggccagcaggggtctgtgtatgggagggcttgtaggaagagag 260
Query: 61 atggcgggagcaccctcctttcctcttgtgtctcaaacccttccattccacaccatccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcgggagcaccctcctttcctcttgtgtctcaaacccttccattccacaccatccat 320
Query: 121 atcagacactagagcactccagaagccccaggaatgtttttcccttccccagacattcaa 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accagacactagagcactccagaagccccaggaatgtttttcccttccccagacattcaa 380
Query: 181 gaagaccagtgtcaatcacgatccccgtgggtgtgccacacatttgtgtgtgtgtgtgtg 240
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gaaggccagtgtcaatcacgatccccgtgagtgtgccacacatttgtgtgtgtgtgtgtc 440
Query: 241 tgt--ctgtgagtgtgtgtgtgcatgtgtgtgtgtctctgtctgtatgtctgtctctgtg 298
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcctgtgagtgtgtgtg--catgtgtgtgtgtctctgtctgtatgtctgtctctgtg 498
Query: 299 tgtatgtatctgtgtgtgtctctgtatatctg 330
||||||||||||||||||||||||| ||||||
Sbjct: 499 tgtatgtatctgtgtgtgtctctgtgtatctg 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
