Query= MSMg01no196_c10.b1 MSMg01no196_c10.b1 CHROMAT_FILE:
MSMg01no196_c10.b1 PHD_FILE: MSMg01no196_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:36 2005
(668 letters)
>mm_chr14_14442457_14443524
Length = 1068
Score = 1268 bits (656), Expect = 0.0
Identities = 662/664 (99%)
Strand = Plus / Minus
Query: 5 gaattctggggaccagctaagtaagcatgggctgtgagcatctgcacccaataagccatc 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 868 gaattctggggaccagctaagtaagcatgggctgtgagcacctgcacccaataagccatc 809
Query: 65 ttatttgccaaagctatttctttggaaagatatatacactcagaaactgttggtatctcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ttatttgccaaagctatttctttggaaagatatatacactcagaaactgttggtatctcc 749
Query: 125 cttctcccatatgcacaggaaaaccttaatactctagttggaaaaggagaataacacaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 cttctcccatatgcacaggaaaaccttaatactctagttggaaaaggagaataacacaga 689
Query: 185 tgcacatagagaaagagacagggctaagagatagagaatttgaaaagcccagtttcttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tgcacatagagaaagagacagggctaagagatagagaatttgaaaagcccagtttcttga 629
Query: 245 ctatcttccagctcacagccctgcatttcagtctagagagacacttctactttttctcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctatcttccagctcacagccctgcatttcagtctagagagacacttctactttttctcat 569
Query: 305 tattttttggttttgtttgagctagctcaatgtgtcttgaaggcaagcacatttgaaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tattttttggttttgtttgagctagctcaatgtgtcttgaaggcaagcacatttgaaatt 509
Query: 365 caaaaccctctgttgactgattaatatccactgcctgatgatagtaatacataattcatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 caaaaccctctgttgactgattaatatccactgcctgatgatagtaatacataattcatt 449
Query: 425 ttccttgtggtatgaagttttagtccaatagtttgaggtccatcctggaacttttctact 484
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 448 ttccttgtggtatgaagttttagtccaatagtttgaggtccatccaggaacttttctact 389
Query: 485 ggagaaagaaaatgggaacttaggtaaaagttcctactacctggcaactcatagagagaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggagaaagaaaatgggaacttaggtaaaagttcctactacctggcaactcatagagagaa 329
Query: 545 tattttggttgcctgtcattccatttttggttttccattctcggttttcaggcctcagca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tattttggttgcctgtcattccatttttggttttccattctcggttttcaggcctcagca 269
Query: 605 ggctcatgatatctttccaaaaacctatcattttcatcctgaaactggattctgtttctc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggctcatgatatctttccaaaaacctatcattttcatcctgaaactggattctgtttctc 209
Query: 665 tttg 668
||||
Sbjct: 208 tttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no196_c10.g1 MSMg01no196_c10.g1 CHROMAT_FILE:
MSMg01no196_c10.g1 PHD_FILE: MSMg01no196_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:36 2005
(618 letters)
>mm_chr14_14371044_14372061
Length = 1018
Score = 1052 bits (544), Expect = 0.0
Identities = 596/618 (96%), Gaps = 8/618 (1%)
Strand = Plus / Plus
Query: 1 attgtcaccttagtacacaatattttgtaattggaaatagcacatcttcccaatgtattt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtcacctcagtacacaatattttgtaattggaaatagcacatcttcccaatgtattt 260
Query: 61 aagtttgccagcatagaaggggcatttcacacaaagccactgtgagtataactatgagca 120
||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcttgccagtatagaaggggcctttcacacaaagccactgtgagtataactatgagca 320
Query: 121 gtaatatgcttcccaaacgctgtctgtcagaccaattgtccaccccagattaattcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaatatgcttcccaaacgctgtctgtcagaccaattgtccaccccagattaattcagag 380
Query: 181 ccttttctctgcaaaactgaagaagaaagtctgtttcatctgtgcataaaagaggcgcca 240
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 381 ccttttctctgcaaaactgaagaagaaagtccgtttcatgtgtgcataaaagaggcgcca 440
Query: 241 gtgtagaaaacaaaccagtgcccattttgaaggcagttgcaaacaagtctgtggcttttg 300
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 441 gtgtagaaaacaaaccagtgcccattttcaaggcagttgcaaacaagtctgtggctgctg 500
Query: 301 tagttcctctcctgttctggagatgaagcccaaggagatagctggcgttggaagtttcat 360
|| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 taattcctctcccgttctggagatgaagcccaaggagatagctggagttggaagtttcat 560
Query: 361 gatttagacaatgcttcattagtttctgcaaccacagtcatatagttaagattctgcata 420
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattcagagaatgcttcattagtttctgcaaccacagtcatatagttaagattctgcata 620
Query: 421 tttacttaaatgtgatatgtctgtacaagtgggaaagggtaactttaatgtttctccacc 480
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 tttacttaaatgtgatatgtctgtacaagtgggaaagggtaacttta--------ccacc 672
Query: 481 cacatgactattaaattctgtataatgtcaactaaacacagtgtaccaacatactttttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cacatgactattaaattctgtataatgtcaactaaacacagtgtaccaacatactttttc 732
Query: 541 caaagttgataacaaagctacagtttctgagggtacaaattatatatgtggctataaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 caaagttgataacaaagctacagtttctgagggtacaaattatatatgtggctataaata 792
Query: 601 tgtgtatttatctaagaa 618
||||||||||||||||||
Sbjct: 793 tgtgtatttatctaagaa 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
