CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATATTATTACTTATGTAATATTATGGACACCTTCTAACTTTTCT
ACTTCCTGTGTTCAGAATTGTTTCAGCGATGAAACTATGAGAACTTTGCC
ACCATTTCATTTGACACATTCCTTGTTCCCCAAGACTTGATTTGCAATCA
ACAGTTATGCAAATTTCATATCAAGTTATGTTTTCACAATTAAACTTGCA
ATAACATATGCAGCCATTGCAACAGATAATATGACAAAATGTCAGAGGTG
GGGACAAGATAGAGTAATCAAATTTGTGGGGCTTTGAAAGTAATTTAATA
ATAGAAGGATTTATTTTTTTCCAAAGGCTTGTGTTTCCTAGAGAATATGC
AGGGAAGCCAAGTCATATAGCTTTAATGTCTTGTTTTGCTTATGTATCAC
TTCATGTAAAGTTTTTGATAATTTCAATGTGAATTTTATTAAACAATGCC
TATGGACAATTTTCACTGGGGCTCATGACAAATTGAAAATGTATGACAAT
CCCAGTCTACTTGCTGTGAGTATAGTAACTATATAAAATATTTGATGTTT
TCTCCATCCATTATGCAATTAGAACATCTTGTATAGTCTTTAAAATGTCA
ATTATTTCAAATCTTTTCATATTCTTATAAGGGCGATAATTTGCGTTTAT
TACTAGCACACCTCCTCGGTCTTTACCCCACACCCTCTTCTACA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCA
GAGAAGCACCTGAAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATTAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAG
ATCAAAAATTCAGATGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTGGGATTGCGGGCTTGTACAACTACTCTGGA
AATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGAT
CCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCTGTAA
GAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACACAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAAGCAAATGGTTGGACTTGGAGGGCATCATCCTGA
GTGAGGTAACACATTCTCAAAAGGAACTCACACAATATGTATTCATTGAT
AAGTGGATATTACCCCAAACCTAGGATGCCCAAGATATAAGAAACAATTT
CCTAAACATATGAAACCTCACGCATAATGAAGAATGGACGGTG

Query= MSMg01no196_n11.b1 MSMg01no196_n11.b1 CHROMAT_FILE:
MSMg01no196_n11.b1 PHD_FILE: MSMg01no196_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:31 2005
         (552 letters)



>mm_chr14_109513078_109514030
          Length = 953

 Score =  901 bits (466), Expect = 0.0
 Identities = 529/550 (96%), Gaps = 3/550 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatattattacttatgtaatattatggacaccttctaacttttctacttcctgt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaattccatattattacttatgtaatattatggacaccttctaacttttctacttcctgt 694

                                                                       
Query: 65  gttcagaattgtttcagcgatgaaactatgagaactttgcc-accatttcatttgacaca 123
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 693 gttcagaattgtttcagcgatgaaactatgagaactttgccaaccatttcatttgacaca 634

                                                                       
Query: 124 ttccttgttccccaagacttgatttgcaatcaacagttatgcaaatttcatatcaagtta 183
           |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 633 ttccttgttccccaagtcttgatttacaatcaacagttatgcaaatttcgtatcaagtta 574

                                                                       
Query: 184 tgttttcacaattaaacttgcaataacatatgcagccattgcaacagataatatgacaaa 243
            ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 573 cgttttcacaattaaacttgcaataacatatgcagccattacgacagataatatgacaaa 514

                                                                       
Query: 244 atgtcagaggtggggacaagatagagtaatcaaatttgtggggctttgaaagtaatttaa 303
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atgtcagagatggggacaagatagagtaatcaaatttgtggggctttgaaagtaatttaa 454

                                                                       
Query: 304 taatagaaggatttatttttttccaaaggcttgtgtttcctagagaatatgcagggaagc 363
           ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 453 taataaaagaatttatttttt-ccaaaggcttgtgtttcctagagaatatgcaggaaagc 395

                                                                       
Query: 364 caagtcatatagctttaatgtcttgttttgcttatgtatcacttcatgtaaa-gtttttg 422
           ||| |||||||| |||||||||||||||||||||||| ||| || ||| ||| |||||||
Sbjct: 394 caactcatatagttttaatgtcttgttttgcttatgtgtcattttatgcaaaagtttttg 335

                                                                       
Query: 423 ataatttcaatgtgaattttattaaacaatgcctatggacaattttcactggggctcatg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ataatttcaatgtgaattttattaaacaatgcctatggacaattttcactggggctcatg 275

                                                                       
Query: 483 acaaattgaaaatgtatgacaatcccagtctacttgctgtgagtatagtaactatataaa 542
           |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 274 acaaattgaaaatgtatgccaatcccactctacttgctgtgagtatagtaactatataaa 215

                     
Query: 543 atatttgatg 552
           ||||||||||
Sbjct: 214 atatttgatg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 953
Length adjustment: 10
Effective length of query: 542
Effective length of database: 943
Effective search space:   511106
Effective search space used:   511106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)