Query= MSMg01no198_l01.b1 MSMg01no198_l01.b1 CHROMAT_FILE:
MSMg01no198_l01.b1 PHD_FILE: MSMg01no198_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:59 2005
(324 letters)
>mm_chr14_118156248_118156971
Length = 724
Score = 538 bits (278), Expect = e-157
Identities = 308/318 (96%)
Strand = Plus / Minus
Query: 7 gaattctggatttttggagcatcccctaaggtcgtatttgagaatatccagaaacacagg 66
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaattccggatttttggagcgtcccctaaggtcgtatttgagaatatccagaaacacagg 465
Query: 67 caaaataaatcataaaaaccaaactaagaagtggtcgtcagctatcttggctatgtcttt 126
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 464 caaaataaatcataaaaaccaaactaagaagtggtcgtcagctgtcttggctatgtcttt 405
Query: 127 cttggttctgatttcagtggctttttatgtgaggctgaacttggtccagtgtggaagaac 186
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 404 cttggttctgatttcagtggctttctatgtgaggctgaacttggtccagtgtggaagaac 345
Query: 187 tcagccttacggtttgtgtagagcatcccaggtggaatctgtaggtcctagtggaagcag 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcagccttacggtttgtgtagagcatcccaggtggaatctgtaggtcctagtggaagcat 285
Query: 247 cggcctttcttcctgaacagagatcccaatccattctactcttatgaggagaattcaaag 306
|| |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||
Sbjct: 284 cgacctttcttcctgaacagagatcccaatcaagtctactcaaatgaggagaattcaaag 225
Query: 307 aaacaaaatgggcttcag 324
||||||||||||||||||
Sbjct: 224 aaacaaaatgggcttcag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_l01.g1 MSMg01no198_l01.g1 CHROMAT_FILE:
MSMg01no198_l01.g1 PHD_FILE: MSMg01no198_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:00 2005
(274 letters)
>mm_chr14_118046048_118046720
Length = 673
Score = 435 bits (225), Expect = e-126
Identities = 244/251 (97%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1 cgtgagacccttggtagttttaattccaaaggcaatttggatggataatctgtctctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cgtgagacccttggtagttttaattccaaaggcaatttggatggataat-tgtctctaaa 259
Query: 61 gggtctgggttggagagatatctgcttgtgaaatgcaatagggactatagttaccattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggtctgggttggagagatatctgcttgtgaaatgcaatagggactatagttaccattca 319
Query: 121 caaataatgggtttgtgtctgtgtacagtcttggtgcatgcatgcatgtatatgtgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaataatgggtttgtgtctgtgtacagtcttggtgcatgcatgcatgtatatgtgtgtg 379
Query: 181 tggaggggacaactctgggtatgtgtgtgtgtgcg--tgtgcgtgtgtgtgtgtgtgtgt 238
||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||
Sbjct: 380 tggaggggacaactctgggtatgtgtgtgtgtgcgcgtgtgcgtgtgcgtgtgcgtgtgc 439
Query: 239 gtgtgtgtgtg 249
||||| |||||
Sbjct: 440 gtgtgcgtgtg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
