CATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGATGATTGCATTCTGAACACAGAAAATCACATCTCTTTA
TAAAATTGGAAAATATTTATTTTTCATTCTTTTTTCAAAATTTCTACTAG
ACCTCTGTTTTTGATATAATACCACACATACATACCCATTCTCTGAAATT
ACCTGTATATAGAGTTTGATCCTTCCATTTCCCTGAGGTGAGGGTTTTGT
TTTTGGAAATAAATATTCATGCTTAAGTCAGTTCTCAGATGTCTGAAATT
TAATTCTAAATGTATAACATACAAGTGTTTGATGTTCCAGGTGTCCTGTG
ATAGCATAGACAAACTGAAAAAATGAAGCTCAGTACAGTCACTGTGAAGA
TAGATACCTTTAATTCCTTTTTTTTTTCAAGACAGGATTTCTCTGTGTAG
CCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCA
GAAATCTACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGCC
ACCATGGCCAGCTCCCCCTTAATTCTTTTAAGAGTGCCACTATAAACTTT
ACAATCAGCATCCTCAATAATATAAACACCATTTTACATGAGATAGTTAG
AGAGAAAAGATAATTTTAAACATTTTCTTTTCAAACAAATTCAAAAATTA
TTAGCATTTACAACCAGAAGTCAAAGCACTTTGA

CCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTTGAAAGACAGGGAGGGGAGGG
GAGGGGAAGGGAAGGNNNTTTTTTCTCCTCAAAAAAGGGTNCCCGCCCGC
CCCGCGATGTGGCCCGCCCGCCCCCGACCCCCTTATATTCCCTTTCTCCT
CCCCGTTTTCCCCCTTTTTCTTTTTTTCTTTTCTCTTCCCCGCTTTTCGG
TCCCTTTACTTTTTCCTCTTCTCTGCCCTTCTTTTCCCCCCCTCTTCTTC
CTTTTCTTTCTTTTTCCCTTTGCTTCTTCCCCTTGTTCCCTTCTTCTTTT
TTTTTTTCTTTTCTCCGCTCTTCCCCCCCCCCCCCCCCCCCATATTTTTT
TTTTTTTTTTCCCCCCCCCCCCCCCCCTCACCGGGCTTCGCTACTCTGTT
GTGTCCCCCTTGCCCGCGCGCCCCCCCCCCACACAAAAAAAAAAAACCCC
TCCCCGTCTGTCTGCCCTTTTTTTCTTCTCCTCCTCTCTCCTCTTCTTCT
TTTTCCTCCCCTCTTCCCTTCCCCCCTCTTCTCCTCTCTATTTTTCACCC
CCCCCTCCCCTCGCTTTCTCTCTTTCCTTTTTCCCTTTTTTCCGTGCCCC
CTGTTCTTTCCTTCCCTTCGCTCCTCCCTTTTCCTCTTCCGCTTTGCCCT
TTCTCTTTTTTCTTCTCCCCTCTTTTTCCTGTTTTTCCTCGCGCGTATCT
CCCCCCTTTGTCCGCATCTCCCTTTTTATCCCTCTTTTATCATCTTCCTC
TATCTCTTCTCTCATTATGTTATCACTCTCCCTCGGTTTCACTATCTACC
GCTCCTCTATTGTTTATTCCCTCTTCCCTGCTCTTCCTCTCTTTTCTTTT

Query= MSMg01no206_j08.b1 MSMg01no206_j08.b1 CHROMAT_FILE:
MSMg01no206_j08.b1 PHD_FILE: MSMg01no206_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:48 2005
         (573 letters)



>mm_chr14_124862450_124863422
          Length = 973

 Score = 1000 bits (517), Expect = 0.0
 Identities = 553/569 (97%), Gaps = 7/569 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgatgattgcattctgaacacagaaaatcacatctctttataaaattggaaa 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaattctttgatgaatggattctgaacacagaaaatcacatctctttataaaattggaaa 510

                                                                       
Query: 65  atatttatttttcattcttttttcaaaatttctactagacctctgtttttgatataatac 124
           ||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atatttatttcccatttttttttcaaaatttctactagacctctgtttttgatataatac 450

                                                                       
Query: 125 cacacatacatacccattctctgaaattacctgtatatagagtttgatccttccatttcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cacacatacatacccattctctgaaattacctgtatatagagtttgatccttccatttcc 390

                                                                       
Query: 185 ctgaggtgagggttttgtttttggaaataaatattcatgcttaagtcagttctcagatgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctgaggtgagggttttgtttttggaaataaatattcatgcttaagtcagttctcagatgt 330

                                                                       
Query: 245 ctgaaatttaattctaaatgtataacatacaagtgtttgatgttccaggtgtcctgtgat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgaaatttaattctaaatgtataacatacaagtgtttgatgttccaggtgtcctgtgat 270

                                                                       
Query: 305 agcatagacaaactgaaaaaatgaagctcagtacagtcactgtgaagatagataccttta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agcatagacaaactgaaaaaatgaagctcagtacagtcactgtgaagatagataccttta 210

                                                                       
Query: 365 attcc-------ttttttttttcaagacaggatttctctgtgtagccctggctgtcctgg 417
           |||||       ||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 209 attcctttttttttttttttttcgagacagggtttctctgtgtagccctggctgtcctgg 150

                                                                       
Query: 418 aactcactctgtagaccaggctggcctcaaactcagaaatctacctgcctctgcctccca 477
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 149 aactcactctgtagaccaggctggcctcaaactcagaaatccacctgcctctgcctccca 90

                                                                       
Query: 478 agtgctgggattaaaggcatgtgccaccatggccagctcccccttaattcttttaagagt 537
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 89  agtgctgggattaaaggcatgtgccaccatggccggctcccccttaattcttttaagagt 30

                                        
Query: 538 gccactataaactttacaatcagcatcct 566
           |||||||||||||||||||||||||||||
Sbjct: 29  gccactataaactttacaatcagcatcct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space:   542169
Effective search space used:   542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)