CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGGCTTCTCTTGGAAAGTATTTGATATTTTCAAAAGATCCACGA
GCTATATCGAAATTCTCAAAGGCAGCCCCATATGAGACATACTTTTATAT
GCTTCTAATTAGCAATTTTAATATCTCATCCCACAATGACGACTTTTTAT
GGGGAATAACGTCTTCGACTTTTGGCTCTTGAGAAAGTGCACCACATATC
ATACAGCTGATTTTTTGGCACTTTAATTTCAACTACTGTGGCTTTGAAAG
GAACTCTGTGTAATTCACTTTTTCTGTTTTGCTAACTTTGTAACAGCTCC
CTGAGATGGGCAGGAGTGGACTCTGTGTATGCTAGATAAACCTCTACCCT
GCTCCTAGCCATTTAGCTACATGATGACTTCATCATTTTTCTTAATGGAA
AAAAATACATTTAAACATTTGTGTAATCTTCTATTTACAGTCTGACACAT
ACACAAGGTCTAGTCCAAGGACATTTGATTATATATACTATATGACCTAA
TTTCCACACACCTTACTATCCATTAAATGAGGTATATTGCTTTCTCATTT
AATTTCAGATTAAATTTTTGAGGCTGAATTATTTAGACATTGTTGCCTTA
ATAGCAAGCTCTATTAGACTTATTCTCTATAGCATCTCTAGTGATTAAGA
ATTTAATCACTAAGATAACGTATATTTCGTGATGACAATGAGCTCTTTTA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTTTATGTATGAGTCTTCACATAT
ATTTCATGGTTTTTCTTCTGTTTGTTTTTTCTACTCAAGTTCATGTGTTT
TTGTTTTACCTTTTTATATTTTGTTATTGTTCTATAGCTGTTGCAGGATA
TTTGGTTACACTATGAACCCTGAGGTTGTGTTTATTTACTGGAAAAGCGT
GCTTCTCCTTGTCGTATGGTTCAGCGCTAGTACAGAATTTTAATCCACGA
GCTTTCTGTTTAACATAAACAGGATTATTTTCACCCATAGGCCAAAAGGC
ATAATGAGCATTCAGTTTCTCACCCACCCGACCCAGAGAGTAATAGCATG
TGTATTAGTATTAGTTTACCCCCCCTTTTTTAAGAAAAATGTATCCTCTT
TTATCTTGATTCCTCCCTCTCATCTGTATTTTTTTTTTTTTCTTCCCTTC
CCCCCCTTGCTCCTCGTTTATCCATCTTTTCGCCCTTCTTTCTCTTCTCT
TTTCCCCTTTTTTTTCCCCCCATTAGTTTTTCTTCATTTTTCTCTCTCTT
CCTTTTTTATTCTAACCCTTTTTTCAACTATTTTTTTCTTTTTCTTTTCC
TTCCCCTTTTCTCTTCCCTCTTTTTTTCTTCCCTTTTCAATTTTTTCTTT
ATCGTCCATTAGAGATATTTCTCCCTCTTTTTTCCTTTTCTATCACTCCT
TTTGACTTGTTCTCAAATTGTGTGATATTATATATTACAATTCCCTTCTC
TACTTTTATTCTCTTACCTTTTTA

Query= MSMg01no206_m18.b1 MSMg01no206_m18.b1 CHROMAT_FILE:
MSMg01no206_m18.b1 PHD_FILE: MSMg01no206_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:05 2005
         (597 letters)



>mm_chr14_97364293_97365289
          Length = 997

 Score = 1114 bits (576), Expect = 0.0
 Identities = 588/592 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattctggcttctcttggaaagtatttgatattttcaaaagatccacgagctatatcgaa 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aattctggcttctcttggaaagtatttgatattttcaaaagatccacgagctatatcgaa 738

                                                                       
Query: 66  attctcaaaggcagccccatatgagacatacttttatatgcttctaattagcaattttaa 125
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 attctcaaaggcagttccatatgagacatacttttatatgcttctaattagcaattttaa 678

                                                                       
Query: 126 tatctcatcccacaatgacgactttttatggggaataacgtcttcgacttttggctcttg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tatctcatcccacaatgacgactttttatggggaataacgtcttcgacttttggctcttg 618

                                                                       
Query: 186 agaaagtgcaccacatatcatacagctgattttttggcactttaatttcaactactgtgg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agaaagtgcaccacatatcatacagctgattttttggcactttaatttcaactactgtgg 558

                                                                       
Query: 246 ctttgaaaggaactctgtgtaattcactttttctgttttgctaactttgtaacagctccc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctttgaaaggaactctgtgtaattcactttttctgttttgctaactttgtaacagctccc 498

                                                                       
Query: 306 tgagatgggcaggagtggactctgtgtatgctagataaacctctaccctgctcctagcca 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgagatgggcaggagtggactctgtgtatgctagataaacctctaccctgctcctagcca 438

                                                                       
Query: 366 tttagctacatgatgacttcatcatttttcttaatggaaaaaaatacatttaaacatttg 425
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttagctatatgatgacttcatcatttttcttaatggaaaaaaatacatttaaacatttg 378

                                                                       
Query: 426 tgtaatcttctatttacagtctgacacatacacaaggtctagtccaaggacatttgatta 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtaatcttctatttacagtctgacacatacacaaggtctagtccaaggacatttgatta 318

                                                                       
Query: 486 tatatactatatgacctaatttccacacaccttactatccattaaatgaggtatattgct 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tatatactatatgacctaatttccacacaccttactatccattaaatgaggtatattgct 258

                                                               
Query: 546 ttctcatttaatttcagattaaatttttgaggctgaattatttagacattgt 597
           |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 257 ttctcatttaatttcagattaaatttttgaggttgaattatttagacattgt 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no206_m18.g1 MSMg01no206_m18.g1 CHROMAT_FILE:
MSMg01no206_m18.g1 PHD_FILE: MSMg01no206_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:05 2005
         (196 letters)



>mm_chr14_97331234_97331829
          Length = 596

 Score =  373 bits (193), Expect = e-108
 Identities = 193/193 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttatgtatgagtcttcacatatatttcatggtttttcttctgtttgttttttctactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttatgtatgagtcttcacatatatttcatggtttttcttctgtttgttttttctactc 260

                                                                       
Query: 61  aagttcatgtgtttttgttttacctttttatattttgttattgttctatagctgttgcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagttcatgtgtttttgttttacctttttatattttgttattgttctatagctgttgcag 320

                                                                       
Query: 121 gatatttggttacactatgaaccctgaggttgtgtttatttactggaaaagcgtgcttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatttggttacactatgaaccctgaggttgtgtttatttactggaaaagcgtgcttct 380

                        
Query: 181 ccttgtcgtatgg 193
           |||||||||||||
Sbjct: 381 ccttgtcgtatgg 393


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 596
Length adjustment: 8
Effective length of query: 188
Effective length of database: 588
Effective search space:   110544
Effective search space used:   110544
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)