Query= MSMg01no213_o08.b1 MSMg01no213_o08.b1 CHROMAT_FILE:
MSMg01no213_o08.b1 PHD_FILE: MSMg01no213_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:03 2005
(315 letters)
>mm_chr14_11100429_11101143
Length = 715
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%)
Strand = Plus / Minus
Query: 5 gaattccttgggtattcctctatgaacaaggtgtcttgccacatactttcctctccctcc 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gaatcccttgggtattcctctatgaacaaggtgtcttgccacatactttcctctccctcc 455
Query: 65 tccttccttatatttttgtttgtgttcatatgtgtgttcttgtatgtatatgtgtatata 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 454 tccttccttatatttttgtttgtgttcatatgtgtgttcttgtatgtatatatgtatata 395
Query: 125 gaggccgaagatcaaagtagaatatcttccccaatcactctctacctttaaaaatattct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gaggccgaagatcaaagtagaatatcttccccaatcactctctacctttaaaaatattct 335
Query: 185 ttggcaattccacacaggtatacagtgaaacctgaacatttttggctccctcagtgttct 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 334 ttggcaattccacacaggtatacagtgaaacctgaacatttttggctccctctgtgttct 275
Query: 245 ctctaattccccttctgcttctgaagaaatctacagtgtctttcacagagcctgcagatt 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctctaactccccttctgcttctgaagaaatctacagtgtctttcacagagcctgcagatt 215
Query: 305 actgatttgc 314
||||||||||
Sbjct: 214 actgatttgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_o08.g1 MSMg01no213_o08.g1 CHROMAT_FILE:
MSMg01no213_o08.g1 PHD_FILE: MSMg01no213_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:03 2005
(294 letters)
>mm_chr14_11000368_11001061
Length = 694
Score = 300 bits (155), Expect = 7e-86
Identities = 170/175 (97%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 1 tttcccaaaca-tgcattgagcttttaccatttggaaaccaggatgtctttgcccagaga 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcccaaacaatgcattgagcttttaccatttggaaaccaggatgtctttgcccagaga 260
Query: 60 tgggaaggcatggctgaaagaagtaggcttggcacaaagtagaaaaagttagcggaggag 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaaggcatgactgaaagaagtaggcttggcacaaagtagaaaaagttagcggaggag 320
Query: 120 ctgccagggtggagcactcaccaaggagcccgcagaggagctgccagggtggagc 174
||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 321 ctggcagggtggagcactcaccaaggagcctgcagaggagctgccagg-tggagc 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
