Query= MSMg01no214_o01.b1 MSMg01no214_o01.b1 CHROMAT_FILE:
MSMg01no214_o01.b1 PHD_FILE: MSMg01no214_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:20 2005
(655 letters)
>mm_chr14_99328718_99329773
Length = 1056
Score = 833 bits (431), Expect = 0.0
Identities = 449/455 (98%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcaacatattttagaggcagagctcatgcaattta-ggggggaaaataaaatg 63
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 455 gaattcctcaacatattttagaggcagaactcatgcaatttagggggggaaaataaaatg 396
Query: 64 cataggtgacatgaattgtttgagcctttgatcttagatatcttgctgggtgtagttcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cataggtgacatgaattgtttgagcctttgatcttagatatcttgctgggtgtagttcac 336
Query: 124 cttgtcgtatacactgtgtttccaacccataatgtgcataaggattccgttaaagggttc 183
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 335 cttgtcgtatacactgtgtttacaacccataatatgcataaggattccgttaaagggttc 276
Query: 184 tgaatagtgagtacattgcatttatggtgtgtgtgtgtgtttatgcatgtgttggatagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgaatagtgagtacattgcatttatggtgtgtgtgtgtgtttatgcatgtgttggatagc 216
Query: 244 atggatgcacatatatttatgtacctgtggaggctagagattgaaatcagatattagttt 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atggatgcacatatatttgtgtacctgtggaggctagagattgaaatcagatattagttt 156
Query: 304 caatgtattaatcacgcttcaccttgttttgtccatgatagaatctctcactaaacctgg 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 caatgtattaatcatgcttcaccttgttttgtccatgatagaatctctcactaaacctgg 96
Query: 364 aactcatgattcattaggctggctgggcacaagcttcaactgtctccttctttccatttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aactcatgattcattaggctggctgggcacaagcttcaactgtctccttctttccatttc 36
Query: 424 cctaagcactaggattccaggaagggatgaccaag 458
|||||||||||||||||||||||||||||||||||
Sbjct: 35 cctaagcactaggattccaggaagggatgaccaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_o01.g1 MSMg01no214_o01.g1 CHROMAT_FILE:
MSMg01no214_o01.g1 PHD_FILE: MSMg01no214_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:20 2005
(598 letters)
>mm_chr14_99305980_99306976
Length = 997
Score = 1143 bits (591), Expect = 0.0
Identities = 596/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 1 agagaacatggaattattaatcacttatatttgataccaaatgtaagcaccactggacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaacatggaattattaatcacttatatttgataccaaatgtaagcaccactggacat 260
Query: 61 gttttaaatgttaaagaaaaaaaaaaaaccttttaaatgtaatgtttaaaaaggagtcac 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 gttttaaatgttaaagaaaaaaaaaaa-ccttttaaatgtaatgtttaaaaaggagtcac 319
Query: 121 agaccgcaatttaattttctcagacagcagtaatgtcacatgctgaaatggcacattctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaccgcaatttaattttctcagacagcagtaatgtcacatgctgaaatggcacattctc 379
Query: 181 gtgtatttttctgaagtctacattttcttttcctaagcctaagatgtgttaggatgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtgtatttttctgaagtctacattttcttttcctaagcctaagatgtgttaggatgaaat 439
Query: 241 taacaacaaagcaccaaaggcttagatactgacagatgttccatattcaaagtgaataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taacaacaaagcaccaaaggcttagatactgacagatgttccatattcaaagtgaataca 499
Query: 301 aaccattcagtatgtatggagtgctttctcgtgcagattattgtactgaataacagatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaccattcagtatgtatggagtgctttctcgtgcagattattgtactgaataacagatat 559
Query: 361 tttaattcagatacaaacagttcaatccatcctttcatgaaaggcttaacaactaactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttaattcagatacaaacagttcaatccatcctttcatgaaaggcttaacaactaactgg 619
Query: 421 gaagtctgtctaccaatgatgggaccatctttatttgcatctctttggggtaaagcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaagtctgtctaccaatgatgggaccatctttatttgcatctctttggggtaaagcttta 679
Query: 481 aactcgaaacaggaagaaaccagagacagtcagtagtgagtgaagtgtgaagggtggaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aactcgaaacaggaagaaaccagagacagtcagtagtgagtgaagtgtgaagggtggaga 739
Query: 541 tagataanaccaaagatgagacagaggcagaaatcaggagatggcccacagctggaga 598
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tagataaaaccaaagatgagacagaggcagaaatcaggagatggcccacagctggaga 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 997
Length adjustment: 10
Effective length of query: 588
Effective length of database: 987
Effective search space: 580356
Effective search space used: 580356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
