Query= MSMg01no216_i23.b1 MSMg01no216_i23.b1 CHROMAT_FILE:
MSMg01no216_i23.b1 PHD_FILE: MSMg01no216_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:36 2005
(329 letters)
>mm_chr14_59751695_59752427
Length = 733
Score = 611 bits (316), Expect = e-179
Identities = 325/330 (98%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 1 ctaaataacttcaggaccgaaaataatgccactatccaaaaagctaaaatatgatatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctaaataacttcaggaccgaaaataatgccactatccaaaaagctaaaatatgatatctg 471
Query: 61 ggaaagatggtcatcagaagcagcattcatcccatgtagccattccatggataaaat--- 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggaaagatggtcatcagaagcagcattcatcccatgtagccattccatggataaaataaa 411
Query: 118 -aaagtggacatggttcacagaaatgttacatttgcagataaattaataactgaatcaat 176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caaagtggacatggttcacagaaatgttacatttgcagataaattaataactgaatcaat 351
Query: 177 gttacctatggatctgtaaacaagttaagagaaaggaagttattttatactggccctgca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gttacctatggatctgtaaacaagttaagagaaaggaagttattttatactggccctgca 291
Query: 237 gtcattactaaaggaagaaagcatgcataagcttttacctttattgaagggacataatgt 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 290 gtcattactaaaggaagaaagcatgcataagcttttacctttattgaagggacataatat 231
Query: 297 gtcaaatttttgaggaaaaattatgaaaaa 326
||||||||||||||||||||||||||||||
Sbjct: 230 gtcaaatttttgaggaaaaattatgaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 733
Length adjustment: 9
Effective length of query: 320
Effective length of database: 724
Effective search space: 231680
Effective search space used: 231680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_i23.g1 MSMg01no216_i23.g1 CHROMAT_FILE:
MSMg01no216_i23.g1 PHD_FILE: MSMg01no216_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:36 2005
(581 letters)
>mm_chr14_59623360_59624340
Length = 981
Score = 1054 bits (545), Expect = 0.0
Identities = 572/585 (97%), Gaps = 8/585 (1%)
Strand = Plus / Plus
Query: 1 tagtcaaatgctatctgctgcttctgtctctctgctgccgctgctcaccaaaggacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tagtcaaatgctatctgctgcttctgtctctctgctgccgctgctcaagaaaggacttgt 260
Query: 61 caactgggaatgatggaagccatctttttgactttcagccactgttacctacagctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caactgggaatgatggaagccatctttttgactttcagccactgttacctacagctctct 320
Query: 121 tctgtgtaagaaggaaataggagggatgaatggttttgtgtttcaggcctttgtgaacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtgtaagaaggaaataggagggatgaatggttttgtgtttcaggcctttgtgaacta 380
Query: 181 agatgtaatcaagtgtgctcgtgtgacacagttcactcccctagttgtgccaggtagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgtaatcaagtgtgctcgtgtgacacagttcactcccctagttgtgccaggtagggt 440
Query: 241 attgtatcttttt----aaatgcctggcatggggtggtctcctcagggaccctgttgctc 296
|||||| || ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 attgtaact----gacgaaatgcctggcatggggtggtctcctcagggaccctgctgctc 496
Query: 297 acctctcacaaagctctggatgcaggcaagatagggggagctctgaaattttccattctg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acctctcacaaagctctggatgcaggcaagatagggggagctctgaaattttccattctg 556
Query: 357 tttccctttctctgctagctcctggaagtctactctatgggacttgtaaatattctttcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttccctttctctgctagctcctggaagtctactctatgggacttgtaaatattctttcc 616
Query: 417 atggtacaacttactgggcattcatcacaaaacaggggtttgttccactttgtctcctaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atggtacaacttactgggcattcatcacaaaacaggggtttgttccactttgtctcctaa 676
Query: 477 cctcaggaaactggggaagggtaactgggactggatatctacctcacagaaagagttctt 536
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 677 cctcaggaaactggggaagggtagctgggactggatatctacctcacagaaagagttctt 736
Query: 537 agtacacctggtcatgtgtcccagaatatcttaactcagactcag 581
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agtacacctggtcatgtgtcccagaatatcttaactcagactcag 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
