Query= MSMg01no217_c19.b1 MSMg01no217_c19.b1 CHROMAT_FILE:
MSMg01no217_c19.b1 PHD_FILE: MSMg01no217_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:33 2005
(334 letters)
>mm_chr14_81101152_81101885
Length = 734
Score = 553 bits (286), Expect = e-162
Identities = 322/338 (95%), Gaps = 8/338 (2%)
Strand = Plus / Minus
Query: 1 agttggttttcatcagtattttatcacagcaatagtaaacaaactacggggctttccaat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 agttggttctcatcagtattttatcacagcaatagtaaacaaactacggggctttccaat 295
Query: 61 caattcccaattcatataagcaaaataatctagtgcatacttctgaaccccacccccggc 120
||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 294 caattaataattcatttaagcaaaataatctagtgcatacttccgaaccccacccccggc 235
Query: 121 acacctactcctgacaactcttcactgagacacgtcccaaaagattctaggttgtgtcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 acacctactcctgacaactcttcactgagacacgtcccaaaagattctaggttgtgtcaa 175
Query: 181 gttgacaattgaaactaaccatctcttgtcgggtactaacttggatcctcaaaggaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gttgacaattgaaactaaccatctcttgtcgggtactaacttggatcctcaaaggaaaga 115
Query: 241 atcggtctttttgtagtccttcgcgatctacgagagggggtaaattttc----gacattg 296
||| |||||||||||||| ||||||||||||||||||||||||| | |||||||
Sbjct: 114 atcagtctttttgtagtcgttcgcgatctacgagagggggtaaa----cagccgacattg 59
Query: 297 cattgttcctaactacagaggaatctacaggaactgag 334
||||||||||||||||||||||||||||||||||||||
Sbjct: 58 cattgttcctaactacagaggaatctacaggaactgag 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_c19.g1 MSMg01no217_c19.g1 CHROMAT_FILE:
MSMg01no217_c19.g1 PHD_FILE: MSMg01no217_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:33 2005
(380 letters)
>mm_chr14_80960988_80961767
Length = 780
Score = 629 bits (325), Expect = 0.0
Identities = 368/387 (95%), Gaps = 13/387 (3%)
Strand = Plus / Plus
Query: 1 taggattctgtctgtaagcataatggaataacattaataatgtcagggtttggttcttat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 200 taggattctgtctgtaagcataatggaataacattaataatgtcagggattggttcttat 259
Query: 61 ccattgga-gggggtctcaaatgcaagcccattacactgatcagcaaactgagttatggg 119
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 260 ccattggaggggggtctcaaatgcaagcccattacaatgatcagcaaactgagttatggg 319
Query: 120 tgaaagatgtgagaattttttccagttttaacttagatggaagaggttcctatggttgaa 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgagagatgtgagaattttttccagttttaacttagatggaagaggttcctatggttgaa 379
Query: 180 gcagaaagaaatactatttggatgtccaaatatgttttacttcttaattgccttactaaa 239
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcagaaagaaatattatttgcatgtccaaatatgttttacttcttaattgccttactaaa 439
Query: 240 gcccaactttgttgttaattctagaccattccaacatcctagctgtgttgtaagaacaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcccaactttgttgttaattctagaccattccaacatcctagctgtgttgtaagaacaag 499
Query: 300 agctctatttat-ttttttgctcaaaattaatactttat-----tttggagcaacagaag 353
|||||||||||| |||||||||||||||||| | || ||||||||||||||||
Sbjct: 500 agctctatttatattttttgctcaaaattaa-a----ataggaatttggagcaacagaag 554
Query: 354 agggcttgaaaacaacagaactgctaa 380
|||||||||| |||||||||||||||
Sbjct: 555 ggggcttgaaa-caacagaactgctaa 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
