Query= MSMg01no217_d17.b1 MSMg01no217_d17.b1 CHROMAT_FILE:
MSMg01no217_d17.b1 PHD_FILE: MSMg01no217_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:38 2005
(679 letters)
>mm_chr14_89491469_89492547
Length = 1079
Score = 1270 bits (657), Expect = 0.0
Identities = 670/675 (99%), Gaps = 3/675 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagattagcttaggccagtatacagaattattgttactctagcctgaaaacctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gaattcaagattagcttaggccagtatacagaattattgttactctagcctgaaaacctg 915
Query: 65 cccaaacatacacacacatgcacacacacacacacacacacacacacacacacaaacaag 124
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 914 cccaaacatacacacacatg--cacacacacacacacacacacacacacacacaaacaag 857
Query: 125 cacacatacacacacatgtacacacactnctctctcatacacacacacatacacaaaaaa 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 856 cacacatacacacacatgtacacacact-ctctctcatacacacacacatacacaaaaaa 798
Query: 185 tccacacacttaatcttgagatttgctaaacaatatttcttacttcaatatttattaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tccacacacttaatcttgagatttgctaaacaatatttcttacttcaatatttattaaca 738
Query: 245 gtaatgttaagtaatatgaataaattattcactcagaaatttgcttaaagaactaattaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtaatgttaagtaatatgaataaattattcactcagaaatttgcttaaagaactaattaa 678
Query: 305 cctccaacatgtttgaaaacatttttcttttatattcttatttactcattctagaaaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cctccaacatgtttgaaaacatttttcttttatattcttatttactcattctagaaaata 618
Query: 365 gtgaattttataataattagcatcacttcaaataatatctattactatttgtattttatg 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtaaattttataataattagcatcacttcaaataatatctattactatttgtattttatg 558
Query: 425 gcttatgtagagtactgtctttcacaggaagttatattaagcatgctacagcaataacaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gcttatgtagagtactgtctttcacaggaagttatattaagcatgctacagcaataacaa 498
Query: 485 tctttcataaagacctgagatagatgttcttatatcccttatgcatagctttcttacttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tctttcataaagacctgagatagatgttcttatatcccttatgcatagctttcttacttc 438
Query: 545 caggaatgagcaagtccttaaccaacccgcttgatattttagatatatctagacctagtg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caggaatgagcaagtccttaaccaacccgcttgatattttagatatatctagacctagtg 378
Query: 605 tgatggtcactgtttgttgtcaacttggctacatatgcaattaatttaaacccaaactgc 664
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 377 tgatggtcactgtttgttgtcaacttgactacatatgcaattaatttaaacccaaactgc 318
Query: 665 tgcgtgctgagtatg 679
|||||||||||||||
Sbjct: 317 tgcgtgctgagtatg 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 8
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_d17.g1 MSMg01no217_d17.g1 CHROMAT_FILE:
MSMg01no217_d17.g1 PHD_FILE: MSMg01no217_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:38 2005
(656 letters)
>mm_chr14_89468335_89469390
Length = 1056
Score = 1261 bits (652), Expect = 0.0
Identities = 655/656 (99%)
Strand = Plus / Plus
Query: 1 tatcaaacctgaaatgaagacctaatatcaatactcctcaaactatttcacacaatagaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tatcaaacctgaaatgaagacctaatatcaatactcctcaaactatttcacaaaatagaa 260
Query: 61 acagaaggaacagtaagtaattcattatataaagccacagttactctgatacctaaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaaggaacagtaagtaattcattatataaagccacagttactctgatacctaaacca 320
Query: 121 cacagcgacccaacaaaaaaaggagaatttcaggctgattttacttattaatattgatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcgacccaacaaaaaaaggagaatttcaggctgattttacttattaatattgatgc 380
Query: 181 aaaaatactcaataaaattattgcaaacatcactgatgttaatcttccttaattttctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaatactcaataaaattattgcaaacatcactgatgttaatcttccttaattttctta 440
Query: 241 gaatcaaagaaggaaaccatttgaagtttgaaacacctatatggaagcacattttcctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcaaagaaggaaaccatttgaagtttgaaacacctatatggaagcacattttcctca 500
Query: 301 ttatattggagatgatatgtgcaaacttaatttttgaacctttgcctagaagaaaatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatattggagatgatatgtgcaaacttaatttttgaacctttgcctagaagaaaatatt 560
Query: 361 ctacaaattgagagtctctaattggttcattaaaattcttcaaatccagtgggttaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacaaattgagagtctctaattggttcattaaaattcttcaaatccagtgggttaaaaa 620
Query: 421 tgaggttgataggtaatttctaaactgatttcaatgttgtatgagttctccatcatttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaggttgataggtaatttctaaactgatttcaatgttgtatgagttctccatcatttga 680
Query: 481 gtttgctaaatgtcttgagggtgtttaaggaccatctctggagctggctgaagaaaacgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtttgctaaatgtcttgagggtgtttaaggaccatctctggagctggctgaagaaaacgt 740
Query: 541 cattacaatacagtcttcttatttgaatactacaagaaaaatttgaatatagagctctac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cattacaatacagtcttcttatttgaatactacaagaaaaatttgaatatagagctctac 800
Query: 601 tttatatcattccttgttacaaattgtaccatggctctcatctcctcttgaggcat 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttatatcattccttgttacaaattgtaccatggctctcatctcctcttgaggcat 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
