Query= MSMg01no217_j08.b1 MSMg01no217_j08.b1 CHROMAT_FILE:
MSMg01no217_j08.b1 PHD_FILE: MSMg01no217_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:14 2005
(280 letters)
>mm_chr14_107492740_107493420
Length = 681
Score = 509 bits (263), Expect = e-148
Identities = 272/275 (98%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 5 gaattccatctaagtctcggaagtagtataccatggctgacatctgggttacacgagtgt 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatctaagtctccgaagtagtataccatggctgacatctgggttacacgagtgt 264
Query: 65 ccaaaccaattgtgaaatacagcttcttgatgcacaaggtgacaataaggagattcatct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaaccaattgtgaaatacagcttcttgatgcacaaggtgacaataaggagattcatct 324
Query: 125 tattggttacctgagaaacagaaatgacatggaagcatgaattggctgcattttgttctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattggttacctgagaaacagaaatgacatggaagcatgaattggctgcattttgttctt 384
Query: 185 cattacatgtccaaaagctaacccaaaggtgcaaggaaatgttatttgttgttgttattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattacatgtccaaaagctaacccaaaggtgcaaggaaatgttatttgttgttgttattg 444
Query: 245 tttttttttt-cctgagaattaaatcagcctctgt 278
|||||||||| ||||||||||||||||| ||||||
Sbjct: 445 tttttttttttcctgagaattaaatcagtctctgt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 681
Length adjustment: 9
Effective length of query: 271
Effective length of database: 672
Effective search space: 182112
Effective search space used: 182112
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no217_j08.g1 MSMg01no217_j08.g1 CHROMAT_FILE:
MSMg01no217_j08.g1 PHD_FILE: MSMg01no217_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:14 2005
(291 letters)
>mm_chr14_107584721_107585411
Length = 691
Score = 563 bits (291), Expect = e-165
Identities = 291/291 (100%)
Strand = Plus / Minus
Query: 1 atcctatcttcatttggtagaaacatggtatgcaaattagttaatgaaatgagagggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atcctatcttcatttggtagaaacatggtatgcaaattagttaatgaaatgagagggagg 319
Query: 61 attatatgtggtttagaatcttattagtataataaaatagccttgatcttgacatattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 attatatgtggtttagaatcttattagtataataaaatagccttgatcttgacatattaa 259
Query: 121 aaaagagcccattgaaacctttaacagccatttcctttattattattattgttaatgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaaagagcccattgaaacctttaacagccatttcctttattattattattgttaatgaat 199
Query: 181 gtatttattcactttgcatcccaatatcagctccccctctcacaataccctctcacacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtatttattcactttgcatcccaatatcagctccccctctcacaataccctctcacacaa 139
Query: 241 attttacccccattatcccctcaccttctcccctgtgaagggtgagcctct 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 attttacccccattatcccctcaccttctcccctgtgaagggtgagcctct 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
