Query= MSMg01no218_b22.b1 MSMg01no218_b22.b1 CHROMAT_FILE:
MSMg01no218_b22.b1 PHD_FILE: MSMg01no218_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:02 2005
(320 letters)
>mm_chr14_82177548_82178267
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Plus
Query: 5 gaattcttacagatgactgagatgtcaacttagacatcatgttcagtctcacccttgcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacagatgactgagatgtcaacttagacatcatgttcagtctcacccttgcct 264
Query: 65 gacctcataactctgaaacagatgttgttcctaagatgtctcatagaacagttctgctat 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacctcataactctgagacagatgttgttcctaagatgtctcatagaacagttctgctat 324
Query: 125 tacaagcatgaataattacatgtttaattcaccttaccagatggtaaaaaaccttttcac 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 tacaagcatgaataattacatgtttaattcaccttaccagatggtgaaaaaccttttcac 384
Query: 185 ccttgaatctccaggtaagagtgtctgccactgtagtaaatgaaaataatagcaaccatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccttgaatctccaggtaagagtgtctgccactgtagtaaatgaaaataatagcaaccatt 444
Query: 245 taataaaacaaaagattcattgtggattttgattttcctactgaagatgaaaaatcaggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taataaaacaaaagattcattgtggattttgattttcctactgaagatgaaaaatcaggc 504
Query: 305 ttttgaattaaatgtg 320
||||||||||||||||
Sbjct: 505 ttttgaattaaatgtg 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_b22.g1 MSMg01no218_b22.g1 CHROMAT_FILE:
MSMg01no218_b22.g1 PHD_FILE: MSMg01no218_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:02 2005
(290 letters)
>mm_chr14_82289951_82290640
Length = 690
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 2/291 (0%)
Strand = Plus / Minus
Query: 1 agtagatgcctaaacttgcaggtctcagacaaatttaacaaccctatacatcaagcaatt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtagatgtctaaacttgcaggtctcagacaaatttaacaaccctatacatcaagcaatt 285
Query: 61 caggtgtaaggacaaacataaagcaaccatcaatatagggtgtcataaagtgaccaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 caggtgtaaggacaaacataaagcaaccatcaatatagggtgtcataaagtgaccaaaca 225
Query: 121 gtgagcagtattgttggagggtataaaagagttgttttaaggaaaatcaatga-ctataa 179
||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 224 gtgagcagtattgttggagggtataaaagagttgttttaaggaaaatcaataagc-ataa 166
Query: 180 agaaaacattgagacatgagtcagtaatccaacagagaaactcagtggagaaatggaagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 agaaaacattgagacatgagtcagtaatccaacagagaaactcagtggagaaatggaagc 106
Query: 240 aaacttaagagatcaaatgaaatcactgagctgaaaaatacacaagaagca 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 aaacttaagagatcaaatgaaatcactgagctgaaaaatacacaagaagca 55
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
