Query= MSMg01no218_m10.b1 MSMg01no218_m10.b1 CHROMAT_FILE:
MSMg01no218_m10.b1 PHD_FILE: MSMg01no218_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:53 2005
(319 letters)
>mm_chr14_84993858_84994579
Length = 722
Score = 518 bits (268), Expect = e-151
Identities = 299/318 (94%), Gaps = 15/318 (4%)
Strand = Plus / Minus
Query: 5 gaattcctactttacaggtaagctttttcttcatcattc---caacatatttagatatca 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 gaattcctactttacaggtaagctttttcttcatcattcctacaacatatttagatatca 365
Query: 62 caatcttcaatttcgttatctacagcaccaatagcttctgtgtccatttatttctcataa 121
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 364 caatcttcaatttcgttatctacagcaccaatagcttctgtgtccattcatttctcataa 305
Query: 122 aaagtagcaatattgcattcagcaccaacttcacggagtctctagtagtctgtaaaagga 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 aaagtagcaatattgcattcagcaccaacttcacggagcctctagtagtctgtaaaagga 245
Query: 182 cacgattatttaacttcatctgcttttctttttgctttcctctgtctgtctgtctgtctg 241
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cacaattatttaacttcatctgcttttctttttgctttcctctgtctgtctgtctgtctg 185
Query: 242 tctgtctgtctgtctgtctgtatgtgtgtgtgtatgtgtgtatttacatgtatgtggtat 301
||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 184 tctgtgtgtctgt------------gtgtgtgtatgtgtgtatttacatgtatgtggtat 137
Query: 302 gtgtatatgcatgtatgt 319
||||||||||||||||||
Sbjct: 136 gtgtatatgcatgtatgt 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_m10.g1 MSMg01no218_m10.g1 CHROMAT_FILE:
MSMg01no218_m10.g1 PHD_FILE: MSMg01no218_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:53 2005
(288 letters)
>mm_chr14_84965920_84966608
Length = 689
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 tcttgaacgtatactttatgggcattccacattctgcaatctcactacaaccatgtaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttgaacgtatactttatgggcattccacattctgcaatctcactacaaccatgtaatg 260
Query: 61 gtgtcataaatatttcagaactaatctgaatctgttcatccctttgtataagcaatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtcataaatatttcagaactaatctgaatctgttcatccctttgtataagcaatttca 320
Query: 121 ttttcctttggtttct-ggatagacaaattacccttcatcgaactccaaaagaaggcaat 179
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ttttcctttggtttctgggatagacaaattacccatcatcgaactccaaaagaaggcaat 380
Query: 180 accatcttccacaatttttcacctgatggtagtaataagcagcgagaaaaatggacttcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accatcttccacaatttttcacctgatggtagtaataagcagcgagaaaaatggacttcc 440
Query: 240 tgttaatgtcatcatttgcataactattagtatcccagcacaccagta 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttaatgtcatcatttgcataactattagtatcccagcacaccagta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
