Query= MSMg01no231_o22.b1 MSMg01no231_o22.b1 CHROMAT_FILE:
MSMg01no231_o22.b1 PHD_FILE: MSMg01no231_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:19 2005
(338 letters)
>mm_chr14_18657852_18658589
Length = 738
Score = 524 bits (271), Expect = e-153
Identities = 322/339 (94%), Gaps = 2/339 (0%)
Strand = Plus / Minus
Query: 1 atgcttataagttcagattatctgtgaag-atggatgtgtttaaacatcttgaactgtat 59
||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct: 538 atgcttataagttcagattatctgtgaagcct-gatgtgtttaaatgtcttgaactgtat 480
Query: 60 tttaaaacccaaagagttcttgaattgtacattgcaaagcaggcctcttctgtgactgct 119
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 479 tttaaaacccaaagagttcttgaattgtacattgtaaaggaggcctcttctgtgactgct 420
Query: 120 gctgcccgttgttttcagtgtcatgtacgctttggaatagcatcattatgggctatgaca 179
| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gttgtccgttgttctcagtgtcatgtacgctttggaatagcatcattatgggctatgaca 360
Query: 180 ccagtcatgttaggccatgctgctgacagtagtgactgtccatagggagaaataagctag 239
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 359 cccgtcatgttaggccatgctgctgacagtagtgactgtccacagggagaaataagctag 300
Query: 240 gaaagggcatccatcatcattgaagacggggagggtgaatctaccactcagagtccacag 299
|||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 299 gaaagggcatccatcatcatcgaagatgggaagggtgaatctaccactcagagtccacag 240
Query: 300 tagcaaagacagctagctgttagagttagagtccaagca 338
|||||||||| |||||||||||||||||||| |||||||
Sbjct: 239 tagcaaagacggctagctgttagagttagagaccaagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_o22.g1 MSMg01no231_o22.g1 CHROMAT_FILE:
MSMg01no231_o22.g1 PHD_FILE: MSMg01no231_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:19 2005
(290 letters)
>mm_chrX_127076840_127077529
Length = 690
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Minus
Query: 1 agtttcctcagttacaaaaggaagcatatacttccaacctcagagaatggctagcaaagc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 488 agtttcctcagttacaaaaggaagcatatacttccaacctcagagaatggttagcaaagc 429
Query: 61 aaattacctgggaaatattatcgacattacagtgtttattaatactagtgataagatttg 120
||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 428 aaagtacctgggaaatattatcgacattacagtatttattaatactagtggtaagatttg 369
Query: 121 atgtacatatgtagtaagaaaacaaaagtaaacaactttataaaaggaaaggcaccttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgtacatatgtagtaagaaaacaaaagtaaacaactttataaaaggaaaggcaccttgt 309
Query: 181 ttgcaagtagcttcaggttagggtatccaggttcctctgtcactggccttcagctactgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttgcaagtagcttcaggttagggtatccaggttcctctgtcactggccttcagctactgc 249
Query: 241 atagtgtttaaacctcagttaccctttttatgcattgacagtacttga 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atagtgtttaaacctcagttaccctttttatgcattgacagtacttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
