Query= MSMg01no232_o02.b1 MSMg01no232_o02.b1 CHROMAT_FILE:
MSMg01no232_o02.b1 PHD_FILE: MSMg01no232_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:28 2005
(680 letters)
>mm_chr14_84666400_84667473
Length = 1074
Score = 1183 bits (612), Expect = 0.0
Identities = 659/678 (97%), Gaps = 8/678 (1%)
Strand = Plus / Plus
Query: 4 ggaattcccatgcatacgtttttatagttcactctatgtcatcttccttacagtattgta 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccatgcataagtttttatagttcactctatgtcatcttccttacagtattgta 263
Query: 64 gatatttatgaattattaattatatttggttttggttgtagttttatgtttactcataac 123
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 gatatttatgaattattaattatatttggtt------gtagttttatgtttactcataac 317
Query: 124 aaaagtagttgaaaataaaagattacatagttctttttaatatacaggtatctaagcatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aaaagtagttgaaaataaaagattacatagttctttttaatatacaggtatctaagcatc 377
Query: 184 tactaccaggaaaatgaaacaagctgtaagattccctccaccctattaaatttaacctaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tactaccaggaaaatgaaacaagctgtaagattccctccaccctattaaatttaacctaa 437
Query: 244 aggcataaactatccttttaggtaattttgcctgccaacctcaggcatttcaaatttcta 303
|| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agatataaactctcctttgaggtaattttgcctgccaacctcaggcatttcaaatttcta 497
Query: 304 cccaggccttaatattatgaaaataattgccaagttggatttagcatgaagaaaataaat 363
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 498 cccaggccttaatattatgaaaataattgcaaagttggatttagcatgaagaaaataaat 557
Query: 364 attacaggtttgggattctgcctgaaccttctctaagggtttacaattttaaattctgtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 attacaggtttgggattctgcctgaaccttctctaagggtttacaattttaaattctgtt 617
Query: 424 cctgaaggatttatctatttggttctacaattaaggtctccactgaagacatgaggtata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cctgaaggatttatctatttggttctacaattaaggtctccactgaagacatgaggtata 677
Query: 484 tgatgttatgacttcagaaagaagttaggactgttaattcattcagttgccttcggaacc 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 678 tgatgttatgacttcagaaagaagttaggactgttaattcattcagttgccttcagaacc 737
Query: 544 tccctggtttccacataggtttggttcatctggtctgaaacatacactggtcatgtttta 603
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 738 tccctggtctccacgtaggtttggttcatctggtctgaaacata-actggtcatgcttta 796
Query: 604 ggttgtttttct-agctctctgtagagacagaagagggaatgatatgaatctatactgat 662
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ggttgtttttcttagctctatgtagagacagaagagggaatgatatgaatctatactgat 856
Query: 663 catttacttttagtctca 680
||||||||||||||||||
Sbjct: 857 catttacttttagtctca 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1074
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1064
Effective search space: 712880
Effective search space used: 712880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_o02.g1 MSMg01no232_o02.g1 CHROMAT_FILE:
MSMg01no232_o02.g1 PHD_FILE: MSMg01no232_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:28 2005
(349 letters)
>mm_chr14_84811522_84812270
Length = 749
Score = 659 bits (341), Expect = 0.0
Identities = 347/349 (99%)
Strand = Plus / Minus
Query: 1 acttaagcacctgtttgtaacctctcatcttctcttaggtaatggtaaaggtgtggtaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acttaagcacctgtttgtaacctctcatcttctcttaggtaatggtaaaggtgtggtaga 490
Query: 61 gaaagagaagctatggataaattctgcccttcattaaaactttccaacagatattgttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaaagagaagctatggataaattctgcccttcattaaaactttccaacagatattgttga 430
Query: 121 cagtttctatattatgtgtgatattttacatcattccatcttttatatattactggatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cagtttctatattatgtgtgatattttacatcattccatcttttatatattactggatat 370
Query: 181 ttcggaatttgggaataaaacagatacctctatcacatttttcttcagcatagaagtttg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 369 ttcggaatttgggaataaaacagatacctctatcacctttttcttcagcatagaaatttg 310
Query: 241 gcttgaacatttaggtatttatttattaatttaccaatgtagaccttgcctttagagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcttgaacatttaggtatttatttattaatttaccaatgtagaccttgcctttagagtga 250
Query: 301 ttgtaataggtgtaaattaactttagagggctgttgtcatagcatttca 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttgtaataggtgtaaattaactttagagggctgttgtcatagcatttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
