CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAACTAAAAATAAAAAACTAAAATCAGAATTTTCAGATCTTAGGC
AGTACATGCAAAAACTTGAGAACTCCACCAAAAGAAAAAAAAACACTCAA
ATTATTTTAATAAAGTCATAGGCTACAAAAATCAAATCAGTTGTGTTCTA
AAAACTAATAAATGAGACTATCGGGGGAAAAAAAACAAGAAAACAATTCC
ATTTATAATAGCATCAAGCAAATAAAATCTTAAGACATGCAAAACCAAGG
TGGAAGCAGGGTTGGTGAGCACACACTGAAACAGGAACACTTATTACATG
ATGGAAACCAGTGTGGATGCTCCTCAAGGAACTAGAAACATAGCCAGATC
TAGCAATCCCACTTCTGAGGACACATCCAAAAGAAATAAAACCACTGGCT
CCAAGAGACCTGCACACCTGTGCTCCCTGCATCACACAATATCCGAGGTA
CAAAAGCATCTAGGTATTTGTCAGGGCAAGAGTGGATAATGTGACACACA
CACCACACAATGAACTATTATTCTGTCCTTTGTGGCATCCTGGATGAATC
TGGAAGCAAAATAAGCTAGATATAAAGGTTACTTCACGACCTTCCTCACT
TGTGAGATCTAAGGAAGATCAAGGACACTAAGGGTAGAAGTGGAAGACGT
GGAGAAATACAGGATAAATAGCTTCCGGGCTCTGAATGA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTCCCAAAAAAGAGAGNAGNNAAANAANNAAGAACCN
NAGGGNNNANNANAAAGGTTTTTGCCCGAAAAAAAGGGAGANNANNNNNA
GANNNAGAANAAGNAGAANAAGNANAGGNNNANANNNNNNNAAAGGAANA
NNNGGNNNNANAAGNGGNGGAAAGNGGGNAGNAAAGNNANNANANNGGAA
NANNNTTTTTATAGAGNNGGNATAANATNTAATAGANAAGAAANTAGNAT
GAATNAGTTAAANTAGGAGAATTTTTTTTTTTNNANGNGAGNNNNNAGGA
GNGGNNNNAAATTTTTTTTTTTGCCCCAACACCCCCCCNAAGNNNNGANA
AGAAAAGGGANAGNNNNAANNNNGAAAACNGNAAAACNNAAAAGGGGGNA
GGCNGGGNGGACANNCANACANNANNCAAGGGGGCNAGAGAANAAANCAG
GANGGGANAAANNNANCANAGNNAACNNACAAAACANCACNAGAAAGGGA
ACCNAAGACAGCNACGGACAGNAAANACAGAGGAAGAAAAGAAACNGGGA
GGCNNCNNANGAAAGGACAAACCCCANCGGGCCACANCAACTGGGCNCAA
CAAGGGGGCAGNCCCTAGGGNCGGAGACGGCCNCCAGNANNACGGGCGGG
AAAGGCACCTTAGGNGAGAAGAAAAAAAAGACAGCG

Query= MSMg01no234_k20.b1 MSMg01no234_k20.b1 CHROMAT_FILE:
MSMg01no234_k20.b1 PHD_FILE: MSMg01no234_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:43 2005
         (694 letters)



>mm_chr14_45930843_45931936
          Length = 1094

 Score = 1265 bits (654), Expect = 0.0
 Identities = 683/694 (98%), Gaps = 5/694 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaactaaaaataaaaaactaaaatcagaattttcagatcttaggcagtacatg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcaaactaaaaataaaaaactaaaatcagaattttcagatcttaggcagtacatg 262

                                                                       
Query: 64  caaaaacttgagaactccaccaaaagaaaaaaaaa--cactcaaattattttaataaagt 121
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 263 caaaaacttgagaactccaccaaaagaaaaaaaaaaacactcaaattattttaataaagt 322

                                                                       
Query: 122 cataggctacaaaaatcaaatcagttgtgttctaaaaactaataaatgagactatcgggg 181
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 323 cataggctacaaaaatcaaatcagttgtgttctagaaactaataaatgagactatcgggg 382

                                                                       
Query: 182 gaaaaaaaa-caagaaaacaattccatttataatagcatcaagcaaataaaatcttaaga 240
           ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaaaaaaaacaagaaagcaattccatttataatagcatcaagcaaataaaatcttaaga 442

                                                                       
Query: 241 catgcaaaaccaaggtggaagcagggttggtgagcacacactgaaacaggaacacttatt 300
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 catgcaa--ccaaggtggaagcagggttggtgagcacacactgaaacaggaacacttatt 500

                                                                       
Query: 301 acatgatggaaaccagtgtggatgctcctcaaggaactagaaacatagccagatctagca 360
           ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||
Sbjct: 501 acatgatggaaaccagtgtggatactcctcaaggaactagaaacatagctggatctagca 560

                                                                       
Query: 361 atcccacttctgaggacacatccaaaagaaataaaaccactggctccaagagacctgcac 420
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcccacttctggggacacatccaaaagaaataaaaccactggctccaagagacctgcac 620

                                                                       
Query: 421 acctgtgctccctgcatcacacaatatccgaggtacaaaagcatctaggtatttgtcagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acctgtgctccctgcatcacacaatatccgaggtacaaaagcatctaggtatttgtcagg 680

                                                                       
Query: 481 gcaagagtggataatgtgacacacacaccacacaatgaactattattctgtcctttgtgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaagagtggataatgtgacacacacaccacacaatgaactattattctgtcctttgtgg 740

                                                                       
Query: 541 catcctggatgaatctggaagcaaaataagctagatataaaggttacttcacgaccttcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catcctggatgaatctggaagcaaaataagctagatataaaggttacttcacgaccttcc 800

                                                                       
Query: 601 tcacttgtgagatctaaggaagatcaaggacactaagggtagaagtggaagacgtggaga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcacttgtgagatctaaggaagatcaaggacactaagggtagaagtggaagacgtggaga 860

                                             
Query: 661 aatacaggataaatagcttccgggctctgaatga 694
           ||||||||||||||||||||||||||||||||||
Sbjct: 861 aatacaggataaatagcttccgggctctgaatga 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)