Query= MSMg01no235_d22.b1 MSMg01no235_d22.b1 CHROMAT_FILE:
MSMg01no235_d22.b1 PHD_FILE: MSMg01no235_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:31 2005
(334 letters)
>mm_chr14_61918268_61919002
Length = 735
Score = 609 bits (315), Expect = e-179
Identities = 330/335 (98%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 1 gaacaccattctgcctacactttgaggcagatgtgtccccagatctatgtgtggcatacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 535 gaacaccattctgcctacactttgaggcagatgtgtccccagatctatgtgtggcacacc 476
Query: 61 cccatgctgtggttatgtgtcactacatgtcacgtacctgacatttccatgagtcttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cccatgctgtggttatgtgtcactacatgtcacgtacctgacatttccatgagtcttgga 416
Query: 121 tccaagctccacttttcactcttgtgccccaaggacttgacccactgacctgtcacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tccaagctccacttttcactcttgtgccccaaggacttgacccactgacctgtcacccaa 356
Query: 181 gagccagcattagcaatagt-cccccccacccctctccagtcacatgaccccaacctaat 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagccagcattagcaatagttcccccccacccctctccagtcacatgaccccaacctaat 296
Query: 240 tatcatcttatgtttttaattaagcgttgcttttgggaagctttaatacaacatctctag 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 295 tatcatcttatgtttttaattaagcgttgcttttgggaacctttaatacaacaactctag 236
Query: 300 atatcatttctgtcattgatcctgccctgggccct 334
||| |||||||||||||||||||||||||||||||
Sbjct: 235 ataccatttctgtcattgatcctgccctgggccct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 735
Length adjustment: 9
Effective length of query: 325
Effective length of database: 726
Effective search space: 235950
Effective search space used: 235950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_d22.g1 MSMg01no235_d22.g1 CHROMAT_FILE:
MSMg01no235_d22.g1 PHD_FILE: MSMg01no235_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:31 2005
(293 letters)
>mm_chr14_61761497_61762189
Length = 693
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Plus
Query: 1 atctgacttttccactttgcaaagattctgtttcaacctgttcatctttgctgactcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgacttttccactttgcaaagattctgtttcaacctgttcatctttgctgactcatg 260
Query: 61 ctttgctctgagaggatagggtatagtctttcttggtagatcagtggaggctgagggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgctctgagaggatagggtatagtctttcttggtagatcagtggaggctgagggcta 320
Query: 121 gaagtctgtctgcctttggcttcttcctactacgtggaaaacatccaaaagtaagttttt 180
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 321 gaagtctgtctgcctttggcttcttcctactgcgtggaaaacatccaaaggtaagttttt 380
Query: 181 accatgcccagcagtgtttactgcttgagaatttgtttggcggtatggatttttgtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accatgcccagcagtgtttactgcttgagaatttgtttggcggtatggatttttgtttaa 440
Query: 241 tccacagataaatgtgtatccggctctcaggctgggggcaggtggagtgctat 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccacagataaatgtgtatccggctctcaggctgggggcaggtggagtgctat 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
