Query= MSMg01no237_j21.b1 MSMg01no237_j21.b1 CHROMAT_FILE:
MSMg01no237_j21.b1 PHD_FILE: MSMg01no237_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:29 2005
(587 letters)
>mm_chr14_117847058_117848044
Length = 987
Score = 1065 bits (551), Expect = 0.0
Identities = 578/587 (98%)
Strand = Plus / Minus
Query: 1 tttgaaatattttatgggaatggtgtcctaaatattttattcagttatccgaaagtgggg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 787 tttgaaatattttatgggaatggtgtcctaagtattttattcagttatccgaaagtgggg 728
Query: 61 taggataacacagagctcattcctttgataaaactctttattgcaaggaagttcaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 taggataacacagagctcattcctttgataaaactctttattgcaaggaagttcaaggtt 668
Query: 121 tctggtcccagctgccaatttgaagaacaaaatccttcaaaggagggaatgggaagctct 180
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 667 tctggtcccagctgccaatttgaagaacaaaatcctccaaaggaaggaatgggaagctct 608
Query: 181 actagagctcactgctctgtgattctccacaaaacaataagattaaaatcacctctcacg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 607 actagagctcactgctctgtgattctccacaaaacaataagattaaaatcgcctctcaag 548
Query: 241 aaatatttttagtttccactaaaatacagaaaaataaatgctgtcctatgttttgatata 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaaaatttttagtttccactaaaatacagaaaaataaatgctgtcctatgttttgatata 488
Query: 301 tttttagtaagagaatatgtttttacaaagccaagaataaaaataaaaattttaacacat 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 487 tttttagtaagagaatatgtttttacaaagccaacaataaaaataaaaattttaacacat 428
Query: 361 tacttataaatgaacccatttcattatggaaagagatatttgtatctgttatgagaatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tacttataaatgaacccatttcattatggaaagagatatttgtatctgttatgagaatgt 368
Query: 421 tatgtggagtgtttttataattaatatgtttattaaagtttaaaacgttctgtgaatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tatgtggagtgtttttataattaatatgtttattaaagtttaaaacgttctgtgaatgaa 308
Query: 481 tgctctttattctcaagaactcactgaaaatgaacacagaagcatttatgtttctgactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgctctttattctcaagaactcactgaaaatgaacacagaagcatttatgtttctgactt 248
Query: 541 tgtcagatactgggaactagaagggaagacgtttctaaacacaaagc 587
||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 247 tgtcaaatactgggaactagaagggaagacgtttctaaacccaaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_j21.g1 MSMg01no237_j21.g1 CHROMAT_FILE:
MSMg01no237_j21.g1 PHD_FILE: MSMg01no237_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:29 2005
(643 letters)
>mm_chr14_117812952_117813994
Length = 1043
Score = 1093 bits (565), Expect = 0.0
Identities = 620/645 (96%), Gaps = 13/645 (2%)
Strand = Plus / Plus
Query: 1 aggccccatcatcatctcacccttcacaagtttgatgatcaaggactgtggatgacattt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 aggccccatcatcatctcacccttcacaagtttgatgatcaaggattgtggatgacattt 260
Query: 61 tacgactgtgctcttgcaatgcctggactagaatcctctgggcttttccaattaatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacgactgtgctcttgcaatgcctggactagaatcctctgggcttttccaattaatggct 320
Query: 121 gagtgatgtttcccataactgatatctctgagctcactgtgatctaaagaataacgaaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 321 gagtgatgtttcccataactgatatctctgagctcactgtgatctaaagaataaggagag 380
Query: 181 ccatttcttctctctatcttaataaccgtagtagagggatcagttcacatattagctgct 240
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ccatttcttctctcgatcttaataaccgtagcagagggatcagttcacatattag----- 435
Query: 241 gatggggtgatattttgaaaaataatatgaacatttgataaaatcatctttcttctattt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 -----ggtgatattttgaaaaataatatgaacatttgataaaatcatctttcttctattt 490
Query: 301 aattcttttacacaggatttactattactattatcattaggaaaaattatagtcatacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aattcttttacacaggatttactattactattatcattaggaaaaattatagtcatacaa 550
Query: 361 attaatagggcaataggatcaagaggcgaatcaaagtaataaatattgcctaagagctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 attaatagggcaataggatcaagaggcgaatcaaagtaataaatattgcctaagagctga 610
Query: 421 tgagatttcagaataacaaaataaaagccacatgaagagttaggacacacctatcaaatg 480
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgagatttcaggataacaagataaaagccacatgaagagttaggacacacctatcaaatg 670
Query: 481 tctcctggttgatgctgagcaaagagaatgattttataatgatatctatacttaaaaatt 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 671 tctcctggttgatgctgagcaaagagaatgattttgtaatgatatctatacttaaaaatt 730
Query: 541 tatcaaaaaataatacttagcactggagtggttcataacac-tgttcctttgtattctga 599
||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||
Sbjct: 731 tatcaaaaaataatacttaacactggtgtggttcgtaacacatgttcctttgtattctga 790
Query: 600 gcacccttttttttt--aaacaaactatagatatgttgtatcact 642
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 791 acaccctttttttttttaaacaaactatagatatgttgtatcact 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
