NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTAGGTTTCTCCCAAAATGTGTTTTTTTTTCTAGATGATGGAA
TAAATTAAAGAATATATGTTCTTTATTTCTCTGTTACCCTTACTTCATAT
TATTTATAAAAATGTGTCTAATCTTGAGCTAGGAGCTCACATGCAAGCAC
TATAGAAAGTAATTCTTGACATTAGAGAATAAGATGACTGTCAGTGTATG
TATGTTCAAAATACATTTAAAATATTTCTGAATAGCTCTACTTTCCCTTT
CCATAGCCTTTACATTTATAATTGCTTATTCAATCCCCATGGCCTTATGA
AACCTACATTTCTAGGATAAAGTAAAAAAAATCTCCCTTTTTCTATTTTG
TTCCATCTGAAGCTATCATAGAACAGATGATGCGTCTGTCAAGTGAATTA
ACTAATAAGGAAGCAGACATTCTGAACATGATCTATAATTTAGATAATTA
TTTTTCTTATAATTTTTCATTGTACTATGTTTACTACTATAGTTTTTATA
TCTGTGTGTTCTTTATGGGTACCATGAATTTGGAAATGAATAGAATCACA
GTTTGGGGAAATTTTTCCTCTATATCTTTAAATGGCAAGAAGAATATACA
TTTAATTTGATATTTCAGTANAATAATCATATTTTCTCTTGNAATTCTTA
AATCATAAAT

NACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCTGTACTGGGGCATATAATCTTTG
CAGCACCAAGGGCCTCTCCTCCCAATGATGGCCGACTAGGCTATCTTCTG
CTACATATGCAACTAGAGACACTAGCTCTGGGGGGTGCTGGTTAGTTCAT
ATTGCTGTTCCTCCTATAGGGTTGCAGACCCCTTCAGCTCCTTTGGGTAC
TTTCTCTAGCTCCTTCATTGAGGGCCCTGTGTTCCATCCAATAGATGACT
GTGAGCATCCACCTCTGTATTCGTCAGGCACTGGCATAGCCTCAAAAGAG
ACAGCTATATCAGGGTCACGTAAGCAAAATCTTGCTGGCATACACAATAG
TGTCTGCGTTTGGTGGCTGATTATGGTATGGATCCCTGGGTGGGGCTTTC
TCTGGATGGTCCTTCCTTCTGTCTCAGCTCCAAATTTTGGGTTTAATTCT
GTATCTTCAATTCGATTCCATTTTTCAACCTGTCTGTTTCTATACCAATA
CCATGTGTTTTTTATTACTATTGCTTTGCAGTACAGCATGATGTCAGGGA
TGCCAATAACTCTAGAACTTCTTTTATTCTTCAGAATTGTTTTAGCTATC
CTAGGTTTTTTGTTTGGTTTATTGGTTTTTTTTTCCTTATGAAAGTGAGA
AAN

Query= MSMg01no261_l16.b1 MSMg01no261_l16.b1 CHROMAT_FILE:
MSMg01no261_l16.b1 PHD_FILE: MSMg01no261_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:11 2005
         (589 letters)



>mm_chr14_97046671_97047659
          Length = 989

 Score = 1116 bits (577), Expect = 0.0
 Identities = 583/585 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttaggtttctcccaaaatgtgtttttttttctagatgatggaataaattaaaga 64
           |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 789 gaattcttaggtttctcctaaaatgtgttttttttcctagatgatggaataaattaaaga 730

                                                                       
Query: 65  atatatgttctttatttctctgttacccttacttcatattatttataaaaatgtgtctaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atatatgttctttatttctctgttacccttacttcatattatttataaaaatgtgtctaa 670

                                                                       
Query: 125 tcttgagctaggagctcacatgcaagcactatagaaagtaattcttgacattagagaata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcttgagctaggagctcacatgcaagcactatagaaagtaattcttgacattagagaata 610

                                                                       
Query: 185 agatgactgtcagtgtatgtatgttcaaaatacatttaaaatatttctgaatagctctac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agatgactgtcagtgtatgtatgttcaaaatacatttaaaatatttctgaatagctctac 550

                                                                       
Query: 245 tttccctttccatagcctttacatttataattgcttattcaatccccatggccttatgaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttccctttccatagcctttacatttataattgcttattcaatccccatggccttatgaa 490

                                                                       
Query: 305 acctacatttctaggataaagtaaaaaaaatctccctttttctattttgttccatctgaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acctacatttctaggataaagtaaaaaaaatctccctttttctattttgttccatctgaa 430

                                                                       
Query: 365 gctatcatagaacagatgatgcgtctgtcaagtgaattaactaataaggaagcagacatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gctatcatagaacagatgatgcgtctgtcaagtgaattaactaataaggaagcagacatt 370

                                                                       
Query: 425 ctgaacatgatctataatttagataattatttttcttataatttttcattgtactatgtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgaacatgatctataatttagataattatttttcttataatttttcattgtactatgtt 310

                                                                       
Query: 485 tactactatagtttttatatctgtgtgttctttatgggtaccatgaatttggaaatgaat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tactactatagtttttatatctgtgtgttctttatgggtaccatgaatttggaaatgaat 250

                                                        
Query: 545 agaatcacagtttggggaaatttttcctctatatctttaaatggc 589
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agaatcacagtttggggaaatttttcctctatatctttaaatggc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)