ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACAGCAGTACGGAGGAGCTTGAGGCATCTTCTCAAACTGTACTCATAG
CTGGGAAACAGAATGGTGAGTGCTGGTGTTAGGCTCACTTTCTCCTTCTA
ATTCAGTGTAGGACTCTGCCCTGTGGCATGATTTCACTCATAATGGCTGC
ACCTTCTCATCCCGCTCAATCTAATCAAGATAATCTTCATTATACAGGAA
CCCAAAAGCCATCTCCCAGGTGACTCTAAACCTCATCAAGATGAAAACTG
AGATTTGTAATCCCAATTGGAATAGCAAATAAAATTTACTCAATAAAAAT
TAGGATAGAAATTATGAACATCAGAGTCCCATCTTAAATATCTGTATGAA
TTCACAGTATTATAAACATATCGAGATTATGAAATGGTTTAGAAGCCAGA
TATAGGGGTGTACATCTTTAATTCCAGAACTTGGGAAGCAAAGGAATGTA
GATCTCAGAGAGTTTGAGGCCAGAGTAGTCTACATAGTGAGTTCCAGGAC
AGCCCGAGTTACTTAAAGAGAAGCGATCTCAAATAAATAGCAAATAAATA
AACAAATATTAATAAAATTGTATAGATTTATTTGTAAATGTTAGTAATAA
TAGGAACATAAGAACATTATTAACTACAACTTTAACAAGTGTAAAGATTC
AATATTTATTATATGTTCATTATTTATTTGATGAG

CCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGACCTGACAGATGTTGGTGCT
GGAGAACAAACTTTCTCTGCAATAGCAGCAAGGAGTCTTAACCTATGAGC
CATCTCTCTAGTCCCTTCTATGTAAAACATATGTAACTGAAACATTTAGA
ATAATTGAGAAGGATTCAAGATAGGAGAGATGCATCTCATGCCAAATTTA
GGGTTTTTTAATAAAAGTGACAATGCTGGAAGAGATGACTGAAACTAGGA
CCATTTTAAGGACAGGGTAAAAATCTAGAACAATGGAAATGCCAGGAATC
TATGACAGTGGCCCTAGCTAATACCCTTAGTAATGGGGTTATGAAACTGG
AAATACCACCCGCCTGTGTATCTTGCCCCCCTCCCCCGTTTTAATAGTCG
CCCGCCCCTTCTTTTCCTAAAAACACCCACNTCNCTAAAATTTGTGTCCC
TGTTTTGCCAGAATATTTCCCTGAATTTATAAGGAGGTTTCCACAAAACA
TTGTATTGTACTCTATCCCTTTTTTTCTTCTAAAAAAAAAAAAAAAAAAA
TATTTTGTTTTTTGTGTTTTTTTATTCCCCATACCATATTTTAATAATTT
TATTTAAAATCCTTTTTTTTAGAGAAAANCCAATGAAATAGNTCTTTTTT
TTTTATTTCCCCTTCTCCCCCCTCCCACGTAAATAAAAATATATTCTTAT
AATCTCTAAATCATGGAAA

Query= MSMg01no262_d01.b1 MSMg01no262_d01.b1 CHROMAT_FILE:
MSMg01no262_d01.b1 PHD_FILE: MSMg01no262_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:46 2005
         (693 letters)



>mm_chr14_39519101_39520192
          Length = 1092

 Score = 1251 bits (647), Expect = 0.0
 Identities = 677/687 (98%), Gaps = 2/687 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacagcagtacggaggagcttgaggcatcttctcaaactgtactcatagctggga 64
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 gaattcacagcagtaaggaggagcttgaggcatcttctcaaactgtactcatagttggga 263

                                                                       
Query: 65  aacagaatggtgagtgctggtgttaggctcactttctccttctaattcagtgtaggactc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacagaatggtgagtgctggtgttaggctcactttctccttctaattcagtgtaggactc 323

                                                                       
Query: 125 tgccctgtggcatgatttcactcataatggctgcaccttctcatcccgctcaatctaatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgccctgtggcatgatttcactcataatggctgcaccttctcatcccgctcaatctaatc 383

                                                                       
Query: 185 aagataatcttcattatacaggaacccaaaagccatctcccaggtgactctaaacctcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagataatcttcattatacaggaacccaaaagccatctcccaggtgactctaaacctcat 443

                                                                       
Query: 245 caagatgaaaactgagatttgtaatcccaattggaatagc-aaataaaatttactcaata 303
           |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 444 caagatgaaaactgagatttgtaatcccaattggaatagcaaaaaaaaatttactcaata 503

                                                                       
Query: 304 aaaattaggatagaaattatgaacatcagagtcccatcttaaatatctgtatgaattcac 363
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 504 aaaattaagatagaaattatgaacatcagagtcccatcttaaatatctgtatgcattcac 563

                                                                       
Query: 364 agtattataaacatatcgagattatgaaatggtttagaagccagatataggggtgtacat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtattataaacatatcgagattatgaaatggtttagaagccagatataggggtgtacat 623

                                                                       
Query: 424 ctttaattccagaacttgggaagcaaaggaatgtagatctcagagagtttgaggccagag 483
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 624 ctttaattccagaacttgggaagcaaaggaatgtagatctcagagagcttgaggacagag 683

                                                                       
Query: 484 tagtctacatagtgagttccaggacagcccgagttacttaaagagaagcgatctcaaata 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tagtctacatagtgagttccaggacagcccgagttacttaaagagaagcgatctcaaata 743

                                                                       
Query: 544 aatagcaaataaataaacaaatattaataaaattgtatagatttatttgtaaatgttagt 603
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aatagcaaataaataaataaatattaataaaattgtatagatttatttgtaaatgttagt 803

                                                                       
Query: 604 aataataggaacataagaacattattaactacaactttaacaagtgtaaagattcaatat 663
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 804 aataataggaacataagaacattattaactacaactttaacaagtgtaa-gattcaatat 862

                                      
Query: 664 ttattatatgttcattatttatttgat 690
           |||||||||||||||||||||||||||
Sbjct: 863 ttattatatgttcattatttatttgat 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space:   739006
Effective search space used:   739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)